Capsicum annuum (peppers): 107847639
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Entry
107847639 CDS
T04646
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
cann03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107847639
03083 Polycomb repressive complex
107847639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107847639
Enzymes [BR:
cann01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107847639
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107847639
HDAC complexes
Sin3A-HDAC complex
107847639
BRAF-HDAC complex
107847639
REST complex
107847639
SHIP complex
107847639
MiDAC complex
107847639
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107847639
Heterochromatin formation proteins
Other heterochromatin formation proteins
107847639
Chromatin remodeling factors
NuRD complex
107847639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107847639
NCBI-ProteinID:
XP_016547507
UniProt:
A0A1U8EJW4
LinkDB
All DBs
Position
11:230069040..230082155
Genome browser
AA seq
426 aa
AA seq
DB search
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQNLFPNEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGSFNRLFKT
IISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFAPDYSLKLPGGHIENMNSKSYIGTIK
MQVMENLRCLQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYDGD
HDNDDA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgaaggacaaaatctcctacttctacgacggtgatgtcggaagtgtatatttt
ggtccgaatcatccgatgaagccgcacaggttgtgcatgactcatcatctggttctagct
tatggtcttcacaacaagatggaagtttataggcctcacaaagcatatccagtggagcta
gcacagtttcattcagctgattatgtagagttcttgaaccgaataaccccagatacacag
aacttgttccccaatgaaatggccagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgtcaaatatatgctggtggaacaatagatgctgcacgtagattg
aataatcagctttgtgacattgcaataaattgggctggtggattgcatcatgctaagaag
tgtgctgcttcaggattttgctacatcaatgacctagtcctggggatattggagcttcta
aagtatcatgcacgggtgctctatattgatattgatgtgcatcatggtgatggtgtagaa
gaggccttttatttcactgacagggttatgaccgttagtttccacaagtatggggataag
ttttttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcctctcaaggatggaatagatgacggcagtttcaatagactcttcaaaacg
attatttcaaaggttgttgaaacatatttacctggtgcgatagttctgcaatgtggggca
gattcgcttgctggtgaccgtctgggctgcttcaacctctccattgatggacatgctgaa
tgtgtaaggtttgtgaagaaatttaatttgccgctgctggtaactggaggtggggggtac
acaaaagagaatgttgcccgttgttgggctctggaaacaggagttcttttagacacagaa
cttcctaatgaaataccagacaatgattacatcaaatattttgcccctgattattcgttg
aagcttcctggtgggcacatagagaacatgaatagcaaatcgtacattggcaccattaaa
atgcaagtaatggaaaatcttcgttgcctccagcatgctcccggtgtacagatgcaagag
gtaccccctgacttttacattcctgattttgatgaagatgagcaaaatccagatgagcgt
gtggatcagcacacccaagataagcatatccaacgggatgacgagtattatgatggcgac
catgacaatgatgatgcctaa
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