KEGG   Capsicum annuum (peppers): 107847639
Entry
107847639         CDS       T04646                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03082  ATP-dependent chromatin remodeling
cann03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107847639
   03083 Polycomb repressive complex
    107847639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107847639
Enzymes [BR:cann01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107847639
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107847639
   HDAC complexes
    Sin3A-HDAC complex
     107847639
    BRAF-HDAC complex
     107847639
    REST complex
     107847639
    SHIP complex
     107847639
    MiDAC complex
     107847639
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107847639
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107847639
  Chromatin remodeling factors
   NuRD complex
    107847639
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107847639
NCBI-ProteinID: XP_016547507
UniProt: A0A1U8EJW4
LinkDB
Position
11:230069040..230082155
AA seq 426 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQNLFPNEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGSFNRLFKT
IISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFAPDYSLKLPGGHIENMNSKSYIGTIK
MQVMENLRCLQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYDGD
HDNDDA
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgcgatcgaaggacaaaatctcctacttctacgacggtgatgtcggaagtgtatatttt
ggtccgaatcatccgatgaagccgcacaggttgtgcatgactcatcatctggttctagct
tatggtcttcacaacaagatggaagtttataggcctcacaaagcatatccagtggagcta
gcacagtttcattcagctgattatgtagagttcttgaaccgaataaccccagatacacag
aacttgttccccaatgaaatggccagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgtcaaatatatgctggtggaacaatagatgctgcacgtagattg
aataatcagctttgtgacattgcaataaattgggctggtggattgcatcatgctaagaag
tgtgctgcttcaggattttgctacatcaatgacctagtcctggggatattggagcttcta
aagtatcatgcacgggtgctctatattgatattgatgtgcatcatggtgatggtgtagaa
gaggccttttatttcactgacagggttatgaccgttagtttccacaagtatggggataag
ttttttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcctctcaaggatggaatagatgacggcagtttcaatagactcttcaaaacg
attatttcaaaggttgttgaaacatatttacctggtgcgatagttctgcaatgtggggca
gattcgcttgctggtgaccgtctgggctgcttcaacctctccattgatggacatgctgaa
tgtgtaaggtttgtgaagaaatttaatttgccgctgctggtaactggaggtggggggtac
acaaaagagaatgttgcccgttgttgggctctggaaacaggagttcttttagacacagaa
cttcctaatgaaataccagacaatgattacatcaaatattttgcccctgattattcgttg
aagcttcctggtgggcacatagagaacatgaatagcaaatcgtacattggcaccattaaa
atgcaagtaatggaaaatcttcgttgcctccagcatgctcccggtgtacagatgcaagag
gtaccccctgacttttacattcctgattttgatgaagatgagcaaaatccagatgagcgt
gtggatcagcacacccaagataagcatatccaacgggatgacgagtattatgatggcgac
catgacaatgatgatgcctaa

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