Capsicum annuum (peppers): 107862632
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Entry
107862632 CDS
T04646
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107862632
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107862632
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
FLIC_barrel
Motif
Other DBs
NCBI-GeneID:
107862632
NCBI-ProteinID:
XP_016563748
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Position
3:244075482..244078031
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AA seq
403 aa
AA seq
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MGTSSLSLLFLLSFLLLLPSLFASSNPQQVVDEVHRSINGSRRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVTPKPGTLRHAVIQTEP
LWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQ
GGNAMVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSSCKDGLIDAIMGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTEGDLMLNGAYFT
QSGAGAKSSSYAKASSLSARPSSLVGNLVSGSGALSCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttcctctctttctttactatttctcctgtcttttcttcttcttctcccgtcc
ctctttgcctcctctaatcctcaacaagttgttgatgaagtacataggagcataaatggt
tcaaggaggaatttgggctatctttcatgtggtactggaaacccaatcgacgattgctgg
cgttgtgatcccaactgggagaaaaaccgccagcgattagctgactgcgccattggattt
gggaagaacgccattggtggccgggatggtaaaatttacgtggtcactgactcaggtgac
gatgatcccgtcaccccaaagccggggacactccggcacgcggtgattcagactgagccc
ttgtggattatattcgcaagggacatggtcatacaattgaaagaagaactaattatgaac
tcgttcaaaacaattgatggaaggggtgctagcgtacacattgcaggtggtccatgtata
actatacagtacgtcacgaatataattatacatggtattcatatacacgattgtaagcaa
ggtgggaacgctatggtgcggagcagtccatcgcattacgggtggaggacaatttctgat
ggtgatggtgtctcgatatttggtggaagccatgtttgggtggaccattgttctttatct
agctgtaaggatggcttgattgacgcaattatggggtctactgcaattaccatttcaaat
aattacatgactcaccatgataaagtcatgcttctgggacacagtgattcctatactcaa
gacaagaacatgcaaatcaccattgcttttaaccactttggggaaggccttgtccaaaga
atgccaagatgtagacatggttacttccatgtggtgaacaatgactacacacactgggaa
atgtatgccattggtggaagtgctgatcccaccatcaatagtcaagggaacagatttctt
gcccctgatatcaggttcagcaaagaggttacgaaacacgaggatgcgccggagagtgaa
tggaagaattggaattggaggacagaaggggacctaatgttaaatggtgcatatttcaca
caatcaggagctggagctaaatcatcaagttatgctaaagcttcaagtttaagtgcaagg
ccttcttcattagtaggcaaccttgtgtctggttcgggtgcactcagctgccgaaagggt
tctcgttgctga
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