Capsicum annuum (peppers): 107862891
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Entry
107862891 CDS
T04646
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107862891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107862891
03036 Chromosome and associated proteins [BR:
cann03036
]
107862891
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107862891
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107862891
PBAF complex
107862891
GBAF(ncBAF) complex
107862891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF1611_N
DUF919
Motif
Other DBs
NCBI-GeneID:
107862891
NCBI-ProteinID:
XP_016564081
UniProt:
A0A1U8FY57
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Position
3:complement(236318935..236324652)
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AA seq
564 aa
AA seq
DB search
MDTSRSQDEPDHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSITRTPRIYKEYRDFI
ITSYREDPTRMLSFTEIRKALVGDVTVLHKVFTFLEKWGLINFDPSNAAAAAAAVGGVAE
EEDKEDEKWRIRVEEGAPHGVRVVAAPHSLKPLIPVKEVVIGDGGGGGRVGGVVKVSPLA
SYSDVYGELVGVEKKESVVCESCKEQCASGYYEYNKDVSINLCEKCFKSGNYDKNKSTDE
FKLMDGANPKANWTEAETLLLLESVLKHGDDWDLVTQNVKTKSKLDCISKLIQLPFGDLM
LGSIHRKLNFLDKNGEVSGVDQAQPAISESGETPGNQSHEQNQEHQQNGDAEDETPPLKK
IRGAPISEASSFLMKQVARISGAVGSHITASAAEAAVTALCYENQCSTVIFDEDDDGLGS
IADISETERASQVESAEGVEKPGRSETEVDVSQRNTIPLTLRMRAATATAVGAAAAHAQL
LADQEEREVEYLVSTLVEAQMKKLQRKMKHVEALNLMMEKQHGQMKDLEESLVAERMDVL
QKMFSAGVSRWKDHAPVKSQSSSV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacacatctcgctcgcaagacgaaccggaccacgacctttacacaatccctagttac
accagttggttttcttggcaaagcatacacgaagtggaaaggctatcattgcgagaattt
ttcgatggaagttcgattacaaggacacccagaatatacaaagagtatagggattttatt
attacatcctaccgtgaagatccgacccgaatgctatcgtttacggagatccgaaaggcg
ttagtgggtgatgtgactgtgttacataaggtgtttacgtttttggagaagtggggtttg
attaattttgacccgagtaacgcggctgcggctgcggcggcggttggtggtgttgcggag
gaagaggataaggaggatgagaagtggaggattagggttgaagaaggggccccacatggg
gttagggttgtggcagctccgcattctttgaaaccactgatacctgtgaaggaggtggtt
attggggatggaggtggaggtggtagggtgggtggtgtagtaaaggtgtcgcctttggca
tcgtattctgatgtttatggggagttggttggggtggagaagaaggaaagtgtggtgtgt
gagagctgtaaagagcagtgtgcttcgggttattatgagtacaacaaggatgtgagcatt
aatttatgcgagaaatgttttaaaagtggtaattatgacaagaacaaatcgacagatgaa
ttcaagttaatggatggggcgaaccctaaagccaactggactgaagcagaaactttactc
ctattagaatctgtactgaagcatggtgatgactgggatcttgttactcaaaatgtcaaa
acaaagagtaaactggattgtatctcaaagcttatacagttgccatttggggatcttatg
cttggttctattcatagaaagcttaattttttggacaagaatggtgaggtaagtggcgtg
gatcaagctcaaccagcaataagtgagtctggagaaactcctggaaatcaatctcacgag
cagaaccaggagcatcaacagaatggagatgctgaagacgaaacccctcctctcaagaaa
atacgcggggctccaatttcggaagccagtagtttcctgatgaaacaggtagctcgcatc
tctggtgctgttggttcacatatcacagcatctgcagctgaggctgctgttacagccctt
tgctatgagaaccagtgttccactgtgatttttgatgaagacgacgatggattgggatcg
attgctgatatcagtgagacagagagggcgagtcaagtcgaaagtgctgaaggggtggaa
aagcctggcagatcagagacagaggtggatgtctctcagaggaatactataccactaact
ttacgtatgagggctgcaactgcaactgctgtaggtgctgctgctgctcatgcccaattg
ttggcggatcaggaagagagagaagtagaatatttagtttctacattggttgaagctcag
atgaagaagttgcaacgcaaaatgaaacatgtcgaagctctgaatctgatgatggagaag
cagcatggccaaatgaaggatctagaagagtctttagttgcagagagaatggacgtcttg
cagaagatgtttagtgccggggtatctagatggaaggatcatgctccggtcaaatctcaa
agcagcagcgtatag
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