Caldilinea aerophila: CLDAP_25330
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Entry
CLDAP_25330 CDS
T01797
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cap03016
]
CLDAP_25330 (truB)
Enzymes [BR:
cap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLDAP_25330 (truB)
Transfer RNA biogenesis [BR:
cap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLDAP_25330 (truB)
Prokaryotic type
CLDAP_25330 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAM00573
UniProt:
I0I5N5
LinkDB
All DBs
Position
complement(3158610..3159611)
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AA seq
333 aa
AA seq
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MQAIYNDRLLQDGLLVIDKPGRDDLAPQPPQSSQQTASDRPSVRLLSSHDVVARVRTWSR
QRRIGHTGTLDPMASGLLLLCLGKATRLVEFYQHQRKRYRAVIVLGAATDTDDATGRVID
TAPIPVLTPAAIERTLASFLGDVEQQAPLYAAIKQQGETLYRRARRGEAVTAPVRTVTFY
ALNLVEFTPPARISVDIECSAGAYIRSLARDLGRALGSAAYLQALRRTRIGEFTIEEAHS
LSAVEQACREGRLSDLLLPVGERLPLPSHRLDDETLRRLGHGQVVLLAGEACDPERRLAV
ARDAQNRLIGIIRRLDETALNGGWRWKAEKWLE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaatctacaacgaccggctgctacaggatggcctgctggtcatcgataagccg
gggcgcgacgatcttgcgccgcagccgccgcaaagcagccagcagactgcctcagacagg
ccttcggtacggttgctctccagccatgatgtggtggcgcgcgtgcgaacatggagcaga
caacgacgaatcggtcacactggcacgctcgacccgatggccagcgggctgttattgctc
tgtctgggcaaagccacgcgattggtggagttttatcaacaccagcgcaagcgataccgg
gcggtgatcgtcctgggcgcagcaactgataccgacgacgccaccggcagggtgattgac
acggcgccgataccggtgctcacccccgctgccatcgaacgaacgctggcatcctttctt
ggcgacgttgaacaacaagcccctctttacgctgcgatcaagcaacagggggagacgctc
tatcgtcgtgcgcgtcgcggggaggccgtcacggcgcctgtgcgcaccgttactttctat
gccctcaacttagtggagttcacgcctcctgctcgcatctctgtagacatcgagtgctcg
gctggcgcctatattcgcagcctggcgcgcgatctgggccgtgcgttgggatcggcggcc
tatctacaggcgttgcgacgcacgcgcatcggcgagtttaccattgaagaagcgcatagc
ctttcagccgttgaacaggcctgccgtgaagggcggctgtccgacctcctcctccctgtg
ggggagcgacttccgctgccctctcatcgtctggatgacgagacgttgcgccgtttgggg
cacgggcaggtcgtcttgcttgcaggagaggcgtgcgacccagagcgacgattggcggtc
gctcgagacgcgcaaaaccgcctcatcggcatcatccggcggctcgacgagacggcgttg
aacggcggatggcgctggaaagcagaaaaatggttggaataa
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