Caproiciproducens sp. NJN-50: EQM14_07600
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Entry
EQM14_07600 CDS
T05807
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
capr
Caproiciproducens sp. NJN-50
Pathway
capr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EQM14_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_07600
Enzymes [BR:
capr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EQM14_07600
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EQM14_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
PIF1
HHH_5
AAA_22
T2SSE
UvrD-helicase
Helicase_RecD
DEAD
AAA_5
nSTAND3
AAA_16
UvrD_C
NTPase_1
HHH
AAA
AAA_24
AAA_29
RsgA_GTPase
ABC_tran
MeaB
TrwB_AAD_bind
SRP54
AAA_28
AAA_12
HHH_2
AAA_18
CbiA
ResIII
PhoH
AFG1_ATPase
NACHT
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
QAT49648
UniProt:
A0A410Q2W2
LinkDB
All DBs
Position
1584328..1586544
Genome browser
AA seq
738 aa
AA seq
DB search
MEEAKLLEMTGTVEQVIFRNEKNGYAVIEVNDGEELITAVGNLPFIDAGEELHLVGNWVT
NQNYGEQFRVEAFERSKPASEAAMLKYLSSGAVKGVGPSTAEKIVKLFGGNALNVMENEP
ERLCAVRGITKPKAEKISEELKRLGGIREMMVQLGGYGISPAEAVRVWKFYGAQSIDCVR
ENPYCLCEDGVSIPFDRADQIAASLERPQDDLCRVRAGILHVIRHNLGNGHTCLPADKLT
AAAAHLLGVDKSLTGEVLEDLKADASVISYVFREREFVFLPDLYRSEFYSAERIKMLLRF
PAPTITGVDGRIEEVEREFGIQYAEGQKQAVREALSRGILILTGGPGTGKTTTLNAIIRL
LELSGEKVLLAAPTGRAAKRMSELTGREAKTIHRLLQVEWDENDQPVFARNEKNLLECDA
LVIDELSMVDTALFEALLRALPLGRRLILVGDSDQLPSVGPGNVIGDLIGSGLLPVVQLR
QVFRQSMQSLIVRNAHRIVAGEMPDLEIRNEDFFFLRCGDPARISATVVDLCKRRLPESY
GFSALTDIQVLTPSRKGELGTQELNKKLQQVLNPPDSRKSELRVNGSIFRVGDKVMQIRN
DYNLPWTRSDGSVGEGVFNGDLGIVQEIDRRVPVLTVRMDDRIVAYESEAAAELELAYAM
TVHKSQGNEFPAVVIPMFRGAPQLAYRNLLYTAVTRAKSLLILVGTPETVRNMVENNRKT
RRYTGLLYLLTGGGEDES
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaaagcttctggaaatgaccggcaccgtggagcaggtcattttccggaat
gaaaaaaacggatatgccgtgatcgaggtcaatgatggcgaggagctgataacggctgtg
ggaaatctgccgtttatcgacgccggcgaagagctgcatctcgtaggaaactgggttacg
aaccaaaactacggggaacagttccgcgtcgaagcctttgaacgctcgaaaccggccagc
gaagcggccatgctgaagtatctctcatccggagccgtgaagggggtcggcccatcgacg
gcggaaaagattgtaaaactctttggaggcaacgcgctgaacgtgatggaaaatgaaccg
gagcgcctgtgtgcggtgcggggcatcacaaagcccaaggcggagaaaatcagcgaagaa
ttgaagaggctcggcgggataagagagatgatggtacagcttgggggttacggcatttcc
ccggcggaggccgtgcgcgtctggaaattttacggtgcgcagtccatcgactgtgtcagg
gaaaatccctactgcctctgcgaggacggagtgagcatccctttcgaccgggccgaccaa
attgccgcttcgctggagaggccgcaagacgatctctgccgggtccgggcggggatcctg
cacgtcatccggcataatctgggaaacggacatacctgtctgccggcggacaagctgact
gccgccgccgcacaccttctgggggtggacaaaagcctgaccggcgaggtcctggaggat
ctgaaagcggatgcgtccgtgatttcctatgtttttcgagagagggaatttgtttttctg
ccggacctgtaccggtccgagttctattcggcggaacggatcaagatgctgctccggttt
cctgctccgacgattacgggagtcgacggcagaatagaagaagtcgagcgtgaatttgga
atccagtatgccgaaggacaaaaacaggccgtgcgggaagccctgtccagaggaattctg
atccttacgggcgggccggggacagggaaaacgacgaccctgaacgcgatcattcgtctg
ctggagctcagcggcgaaaaggtcctgcttgcggcgccgaccggaagggcggcgaaacgc
atgtcggaactgacgggaagggaggcaaaaaccattcatcgcctgctgcaggtggaatgg
gatgaaaacgaccagcctgtctttgccaggaacgaaaaaaatcttctcgagtgcgacgcc
cttgtcatcgacgaactgtccatggtggacaccgcccttttcgaagctcttttgcgggcg
ctcccgctggggcgcaggctgatcctggtcggcgacagtgatcagctcccgtccgtcggt
ccggggaatgtgatcggcgacctgattggctccggccttttgccggtcgtccagcttcgc
caggtctttcgccagtccatgcaaagcctgattgtacgcaatgcccatcggatcgtggcg
ggcgagatgccggaccttgaaataaggaacgaggactttttctttttgcgctgcggtgat
ccggcccggatcagcgcgaccgtcgtcgatctctgcaagcggcgcctgccggaaagctac
ggcttttccgcgctgacggatattcaggtccttacgccctcacggaaaggggaacttggg
acccaggagctgaacaaaaagcttcagcaggtcctcaatcctccggacagccggaaatcg
gaactccgcgtgaacggttcgattttccgcgtgggggacaaggtcatgcagatccggaac
gattacaatctgccatggacccgctctgacggctctgtcggcgagggagtctttaacggc
gaccttggcatcgttcaggaaatagaccgccgcgtgcccgttctcacggtccgcatggat
gaccgcattgtagcctatgagtcggaagcggcggcggaattggagcttgcctatgccatg
acggtacacaaaagccagggaaatgaatttccggcggttgtgattccaatgttccggggc
gccccgcagctggcctaccgaaacctgctttacaccgccgtgacccgggcgaaatccctg
ctgattctggtcggaacgcccgaaaccgtccgcaacatggtggaaaacaaccgcaagacc
aggcgatacacaggtctgctttatcttttaaccgggggcggggaggatgagtcttaa
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