Corynebacterium aquilae: CAQU_11930
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Entry
CAQU_11930 CDS
T05112
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
caqu
Corynebacterium aquilae
Brite
KEGG Orthology (KO) [BR:
caqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caqu03016
]
CAQU_11930
Enzymes [BR:
caqu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CAQU_11930
Transfer RNA biogenesis [BR:
caqu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CAQU_11930
Prokaryotic type
tRNA splicing ligases
CAQU_11930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
APT85632
UniProt:
A0A1L7CIE0
LinkDB
All DBs
Position
complement(2737776..2738939)
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AA seq
387 aa
AA seq
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MSAKEIKNFASLIEDQVLEQAQMTASLPFIYPHVALMPDAHYGMGSSVGTVFGTKGAIIP
AAVGVDIGCGMIGVRTHLRAADLAGKDLVALRDAIEAAIPLSPGNYNSWHIEGTADARCR
ELDALAKDTGVDLSHSPKWRQQLGSLGGGNHFIELCLDEEDHVWMFLHSGSRGVGNKIAR
KHINAAKKQVRDAGVKLASKDLAYLTEGTPEFDSYLADLAWAQRFAYLNREEMMDRFRDC
LADFVGEDIVEEQRINCHHNYTVPEDHYGQTVWLTRKGAVLADAGTPALIPGSMGTRSYV
VRGKGNAEALRSAPHGAGRRMSRTEAKKAFTAGDLDRRMAGIVYRHGDEWVDEIPDAYKD
IDQVMEDAAPLVEVVHTLRQVLNVKGT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaaagaaatcaagaactttgccagcctcatcgaggaccaagtcctagagcag
gcacagatgaccgcctccctgccgtttatctacccgcacgtcgcgctcatgcccgacgcg
cactacggcatgggaagctccgtcggcaccgtcttcggcaccaaaggggccatcatcccg
gcggccgttggcgtcgacataggctgcggaatgatcggggtgagaacccacctccgggcc
gcagatcttgcaggcaaagacttggttgcccttagggatgccattgaggcggccatcccc
ttgagcccgggaaactacaactcctggcacatcgagggcaccgccgatgcgcgctgccgg
gaactcgacgcactcgccaaagacacgggtgtggatctgagccactccccgaagtggcgg
cagcagctcggcagcctgggcggcggcaaccacttcatcgagctctgcctcgacgaagaa
gaccacgtgtggatgttcctgcactccggctcccggggtgtgggcaacaagatcgcgcgc
aaacacatcaacgccgcgaagaagcaggtgcgtgatgcgggcgtgaaactggccagcaag
gatcttgcctacctcaccgagggcacgcccgagttcgattcctacctcgcagaccttgcg
tgggcgcagcgcttcgcctacttaaaccgcgaggaaatgatggatcgcttccgcgactgc
ttggccgacttcgtcggcgaagacattgtggaagaacagcgcatcaactgccaccacaac
tacaccgtgccggaagatcactacgggcagaccgtgtggttgacccgcaaaggtgcggtg
ttggcagacgctggcaccccggcgctgatccccggttccatgggtacgcgctcctacgtc
gtgcgtggcaaaggcaatgccgaggcgctgcgatcggcaccccacggcgcggggcggcgg
atgagtcgcacggaggccaaaaaagccttcaccgccggcgacctcgatcgccgtatggcc
ggcatcgtctaccgccatggcgatgaatgggtggacgaaattccggacgcctacaaggac
atcgaccaggtgatggaagacgccgccccgctcgtggaggtcgtccacaccttgcgccag
gtgctcaacgtcaaaggcacctag
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