Carnobacterium sp. CP1: NY10_1704
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Entry
NY10_1704 CDS
T04230
Name
(GenBank) RNA polymerase sporulation specific sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carc03021
]
NY10_1704
Transcription machinery [BR:
carc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NY10_1704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
DUF2990
Motif
Other DBs
NCBI-ProteinID:
ALV22303
UniProt:
A0A0U3MP81
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All DBs
Position
complement(1749173..1749769)
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AA seq
198 aa
AA seq
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MLDKENFYTQMSDSELIQSIKGGNEEPFDILFERYRALAIKMTNGYYLKSFEAEDFLQEA
RMIFLKAIHTYDSEKGHTFGNFYKLNLKHHMFSLVRKDMAKKRTIEKLAESYDNLLEMRE
GMQHPRHGNVETPTLELLQVREKLADYQATLSEFEQKVFLDYIHNVDVEDIAENLNCDLS
QIKNALDRCKRKMKQLFD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgttggataaggagaatttttatacgcaaatgagcgacagcgaattgattcaaagcatt
aaaggcgggaacgaagaaccatttgatattctttttgagcgataccgtgctttagctatc
aaaatgacaaacggttattatttgaaaagtttcgaagcggaagattttttacaagaagcc
cggatgatttttttaaaagcaattcatacttatgatagtgaaaaaggtcacacgttcgga
aatttttataaattgaacttaaaacaccatatgttcagcctcgtgcgaaaagatatggcc
aagaagagaaccattgaaaagcttgcagaatcttatgataacttgcttgaaatgagagaa
ggaatgcagcatccaaggcacgggaatgtagaaacccctacgcttgaactgctccaagta
cgtgaaaaactggctgattatcaagcgactttgtctgaatttgagcaaaaagtattttta
gattatattcacaatgtcgatgtagaagatattgcggaaaatttgaactgtgacctctct
caaataaaaaatgctttggaccgttgtaagcgcaaaatgaaacaattatttgattga
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