Carnobacterium sp. CP1: NY10_601
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Entry
NY10_601 CDS
T04230
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_601
Enzymes [BR:
carc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NY10_601
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NY10_601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Lant_dehydr_N
Motif
Other DBs
NCBI-ProteinID:
ALV21219
UniProt:
A0A0U3P0T9
LinkDB
All DBs
Position
552707..556324
Genome browser
AA seq
1205 aa
AA seq
DB search
MGLQFILGRANRDKRGIMLDEIAETLATNKHANIFYLVPDHIKFEAEMTVLENLGKMPPF
DKKPLMGMMHLQVFSFSRLAWFWLQDTDTFVKPQLTASGLSMLVRKLLIQYEEELTIYRG
EVRKTGFVQQMTALFMELRTGRITQDDLAHLLMNLGSTPKESDFRLKLQDISLLYQAFDA
ALVGKYIETEDILTALTQKLEELDLSETTVYIESFFRFTAQEQALILALMKKAKQVTVAL
TLDKGYPTEKPELHELFQAAGETYYHLYQAARSENIPVAPDRIIRQLNASYCEELNQLED
FWVETSKLSPVDHNRSKEQISMEDCIEVWAGENKQAEVEHVAKEIRKMVKSGDYRYQDIL
VLTRNIEDYLTILEPIFSENGIVTFIDSADLMNQHPLVEFLDTLLSIKRRNWRYADIMRF
LRTELLVPQTHNDLPAERSARVAVLQQQVNAFREEIDVTENVVLAYGYEGHQWTMKKPWH
YTRFNYEDGDFQSDSDQRIEQIANTVRTFLKDTLLPFYQRLEGAETSGEAAKILYIFLEK
IGVDKQLSFWRDQAVEQNDLETAKKHEQTWQTFLQLLDEYVEVLGDDPFDLESFQTILAS
GFENASYSIVPPSIDQVTYSGLESTRIGTAKVTFLLGMTDVHLPAKNENKTILTEEDRSV
FADFLDPTKYLKPNVESMMASEPFIAYEAFLNSSEKLIMTYPTSNDSKESPKLSPYVDRI
VKGFDIPIQAKVGEASSLSSPANAELLDFIGTQRSTLSQLLLVLRKEQDQKGQLSPFWMG
LYQYFKRTKAIAPTFNHLLVSLVKKNIPHPLKADIATALYGKDLYLSVSRLETFYADHYA
HFLQYGLRLRERDVFGLSPAGTGEFFHDALDQLFKSLLSRDLRFHKLDQETVNAITNEVL
ESLYGKSKFAILSASNRMKFIRDQLGQTVRRMAWALGNQSRRTNMRNVQTEVLFGQLANQ
KGIEGLSFPLNNGGKLYIRGKIDRVDTVEIDHQHYLSVVDYKSSAHAFNYQDAYYGLAMQ
MITYLDTAIANAPRLIGHEAKPAGAFYLHVKNPFIKGDKLVDEQAYTNELLKQFKLDGLL
LEEEDLLLALDPTIEPSTASFIYPFNQLKNETLKSRKFVTLDEMAALRKHNQKLILDAGN
KIMDGVTTLNPFYEKRQFISSVNGELRAVSQFDAMLPENNYRRMEKLSREEILEKMQHEE
EEEEE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgggattacaatttatattaggtcgcgccaatcgtgataaacggggtatcatgttagat
gagattgctgaaacattggccacaaataaacacgccaatatattctatttggtacccgat
catattaaatttgaagctgaaatgacggtcttagaaaatttagggaaaatgccgcctttt
gataaaaagcccctaatgggtatgatgcatttacaagtttttagttttagtcgattggct
tggttttggctgcaagataccgatacatttgttaaacctcaattgaccgcttcagggtta
tcgatgttagtgaggaaattgttgatccaatacgaggaagagttgaccatataccgaggg
gaagtccgtaaaacaggatttgttcagcaaatgacagctctctttatggagctgaggact
ggtcgtattacacaagatgacttagctcatttattgatgaatttaggttcaacacccaaa
gagtcggattttcgtttaaaactacaggatatctcactactttatcaagccttcgatgct
gctctagtcggaaaatacattgaaactgaagatatcttgaccgcattgacccaaaaactg
gaagaattggatctatctgaaaccacggtttatattgaaagcttttttcggtttacagct
caagaacaagctcttatcttagctttgatgaaaaaagccaagcaggtgaccgttgctttg
acgcttgacaaaggttaccctactgaaaaaccagagctgcatgaattatttcaagcagcc
ggagaaacgtattatcatttgtatcaagcagctcgttctgaaaatattccagtcgctcct
gatcgaataatccgccagctgaacgcatcttattgtgaagagttgaatcaattagaagac
ttttgggtcgaaactagcaaattgtcccctgtcgatcataatcgttcaaaggaacaaatt
tcaatggaagactgtatcgaagtctgggctggtgagaataaacaagcagaagttgagcat
gtagcgaaagaaattcggaaaatggtaaaaagtggagactatcgttaccaagatatttta
gtattgacccgaaacattgaagattatttaacgattttagagcctatttttagtgagaat
ggaatcgtgacttttattgacagcgcggatttgatgaaccaacatcccctggtggaattt
ttagatactttattgtccatcaaacgcagaaattggcgttatgcagatattatgcgattt
ttacgaaccgaattactggttccgcaaacacacaacgatttaccagctgagcgaagcgca
cgtgtggctgttcttcaacagcaagtcaatgcctttagagaagaaattgatgtcacagaa
aacgttgttttagcctatgggtatgaaggacatcaatggacgatgaagaaaccatggcat
tacacacgatttaattatgaagacggcgatttccaatccgattccgatcaacgcattgaa
caaatcgctaacacggtacggacgttcttaaaagatacattgttgcctttttaccaacga
ttagaaggtgctgaaacgagcggagaagccgcaaaaatcttatacattttcttagaaaaa
ataggcgtcgacaaacaactttctttttggcgagatcaagcggttgagcaaaatgattta
gagactgctaaaaaacatgaacaaacttggcaaacgttcttacaactgttagatgaatat
gtagaagtactaggagatgacccttttgatttagagagtttccaaacaatcctagcttca
ggttttgagaatgcttcatacagcatcgtacctcccagtatcgatcaagtaacctactcc
ggactggaaagtacgcgtattggaacagcaaaagtaacgtttttattaggaatgacagat
gtccatcttcctgcaaaaaatgaaaataaaacgattctgaccgaagaagaccgcagtgtt
tttgctgattttttagatcctaccaagtatttaaaacctaacgtggaatcgatgatggct
tctgaaccgtttattgcttatgaagcatttttgaattcatcagaaaaactcattatgacg
tatcccaccagtaatgactccaaggaaagtcctaaactctctccttatgtagatcgaatc
gtcaaaggcttcgatattccgatccaagccaaagtcggagaagctagttcgttaagctca
ccggctaatgctgaattacttgattttatcggaacccaacgcagcacattaagccagttg
ttattggttttacgtaaagaacaagatcaaaaaggacagttatcgcctttttggatggga
ttatatcagtactttaaacgaacgaaagccattgcgccaacctttaatcacttactggtc
agtttagtgaaaaaaaatatacctcatcctttgaaagccgacattgctactgctttatac
ggcaaagatttgtacttgtctgtttctcgtttagaaacattttatgcggaccattacgcg
cattttctgcagtacggtttacgcttaagagaaagagacgtgttcggactatcaccagca
ggaacaggagaatttttccatgatgctttagatcaattgtttaaatctcttttgagccgc
gatctgcgtttccataaattagatcaggagacagtgaatgctattacgaacgaagtattg
gagtctctctacggaaagtctaaattcgctattttatcagcttctaaccgcatgaagttt
attcgcgaccaattaggccaaacggttagaaggatggcttgggccctcggcaatcaaagc
agaagaacaaatatgaggaatgtccagacagaagtgctctttgggcaactagcgaaccaa
aaaggaatcgaaggactgtcttttccattaaataacggaggaaaattatacattcgcggt
aaaatcgaccgtgtagataccgtagaaatcgaccatcagcactaccttagcgttgtagat
tataaatcaagtgctcatgcctttaactaccaagatgcctattatggattagcgatgcaa
atgattacctatttggacacggcgattgcaaatgcacctcgactcattggtcatgaagca
aaaccagcaggggctttttatctacacgttaaaaatcccttcatcaaaggcgataaactg
gtagatgaacaagcttataccaatgaactgttgaaacagttcaaattggatggcctttta
ttagaagaagaagacttactattggcgttagatccgactattgagccgtcgactgcttct
ttcatttatccatttaaccaattgaaaaatgaaacacttaaatcacgaaaatttgtcact
cttgatgaaatggccgctttacgaaaacacaatcagaaattgattttggacgctggaaac
aaaatcatggatggcgttaccacgctcaatcctttttatgaaaaacggcaatttatttct
tcagttaatggcgaattacgagctgtttctcaatttgatgcgatgcttcctgaaaacaat
tatcgtcgaatggaaaaattatcgcgtgaagaaattctagaaaaaatgcagcatgaggaa
gaggaggaagaagaatga
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integrated database retrieval system
