Collimonas arenae: LT85_4078
Help
Entry
LT85_4078 CDS
T03512
Symbol
xerD
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
care03036
]
LT85_4078 (xerD)
Chromosome and associated proteins [BR:
care03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LT85_4078 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
DUF3826
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
AIY43236
UniProt:
A0A0A1FFH9
LinkDB
All DBs
Position
complement(4589252..4590154)
Genome browser
AA seq
300 aa
AA seq
DB search
MLNAEHQTAIDEFCDSLWLEDGLAKNSLEAYRRDMTLFALWLQEQPDYKPLFAVQAGDLN
AYFLAKHDSSKATSSNRRLAVLKRFYLLALRQNRISTDPCLHLRSAKQAPRFPKVLSEAQ
VEALLAAPDVSTPLGLRDRTMLELMYASGLRVSELVLLKSLEVGMNEGVLRITGKGNKTR
LLPFGEEARNWIVRYLKDARGQILDGQMDDALFVTARGGAMTRQMFWTLIKKYAAKAVIN
APLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKALHAAHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaacgccgaacatcaaaccgccatcgacgagttttgcgatagcttgtggctggaa
gacggcctggccaagaattcgctggaagcctatcggcgcgacatgaccttgtttgccctg
tggctgcaggagcagccggactacaagccattgtttgcggtccaggccggcgatctgaac
gcctatttcctggccaagcacgacagcagcaaggcgacttcgtcgaatcgccgcctggcg
gtgctgaagcgattctatctgctggcgctgcggcaaaatcgcatcagtaccgatccctgc
ctgcatctgcgttcggccaagcaggcgccgcgctttcccaaggtattgtcggaagcgcag
gtagaggcgctgctggcggcgcctgacgtcagtacgccgctcggcctgcgtgaccgcacc
atgctggagctgatgtacgccagcggtttgcgcgtatccgagctggtgctgttgaaatcg
ctggaagtcggcatgaacgaaggcgtcttgcgaattaccggcaagggcaataaaacccgt
ttgcttccatttggcgaagaagcgcgcaactggatcgtgcgttatctgaaagacgcgcgt
ggccagatcctggatgggcagatggatgacgccctgtttgtgacggcgcgcggaggcgcc
atgacgcggcagatgttctggaccctgatcaagaaatacgctgccaaggcggtgatcaac
gccccgttgtcgccgcataccctgcgccacgcattcgccacccatctgttgaatcacggc
gcggacttgcgcgttgtgcagctattgctgggacatgccgatatatcgaccacgcagatt
tatacgcatgtggcgcgggagcgtctgaaagccttgcatgcggcacatcatccgcgcggc
tag
DBGET
integrated database retrieval system