Cygnus atratus (black swan): 118244085
Help
Entry
118244085 CDS
T09349
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
cata03083
Polycomb repressive complex
cata04110
Cell cycle
cata04330
Notch signaling pathway
cata04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118244085 (HDAC2)
03083 Polycomb repressive complex
118244085 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118244085 (HDAC2)
04350 TGF-beta signaling pathway
118244085 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118244085 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118244085 (HDAC2)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118244085 (HDAC2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
118244085 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
118244085 (HDAC2)
BRAF-HDAC complex
118244085 (HDAC2)
REST complex
118244085 (HDAC2)
SHIP complex
118244085 (HDAC2)
MiDAC complex
118244085 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
118244085 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118244085 (HDAC2)
Chromatin remodeling factors
NuRD complex
118244085 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
118244085
NCBI-ProteinID:
XP_035394690
EnsemblRapid:
ENSACYG00000005814
LinkDB
All DBs
Position
3:complement(50988774..51013053)
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattactatggacaggggcatccaatgaagcctcataggatccgaatgacccac
aacttgctgctaaattatggcttgtacagaaaaatggaaatttaccgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcagatgcagagatttaacgttggagaagat
tgtcctgtgtttgatggcctgtttgagttttgtcagctatcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaactgggctggaggtctt
caccatgctaagaagtcagaggcatctggtttctgttatgttaatgatatcgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggaccttagggacattggtgctggaaagggc
aaatactatgccgtcaactttccaatgagggatggtatagatgatgaatcatatggacaa
atattcaaaccaattatatccaaagtaatggagatgtatcagcccagtgctgtggtatta
cagtgcggagcggattcattgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagtcgtaaagacttttaacttgccattgctgatgttagga
ggaggtggatatactattcgcaacgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccgtacaatgattactttgagtattttggacca
gactttaagcttcatattagtccatcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttgtttgaaaacttacgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataaacgcatagcctgtgacgaagag
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataaaaaa
ggagcaaagaaagccaggatagaagaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacggacaccaaaggagca
aaatcagaacagctcagcaatccttga
DBGET
integrated database retrieval system