KEGG   Cygnus atratus (black swan): 118244085
Entry
118244085         CDS       T09349                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03082  ATP-dependent chromatin remodeling
cata03083  Polycomb repressive complex
cata04110  Cell cycle
cata04330  Notch signaling pathway
cata04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118244085 (HDAC2)
   03083 Polycomb repressive complex
    118244085 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    118244085 (HDAC2)
   04350 TGF-beta signaling pathway
    118244085 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118244085 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cata03036]
    118244085 (HDAC2)
Enzymes [BR:cata01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118244085 (HDAC2)
Chromosome and associated proteins [BR:cata03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118244085 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     118244085 (HDAC2)
    BRAF-HDAC complex
     118244085 (HDAC2)
    REST complex
     118244085 (HDAC2)
    SHIP complex
     118244085 (HDAC2)
    MiDAC complex
     118244085 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118244085 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118244085 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    118244085 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118244085
NCBI-ProteinID: XP_035394690
EnsemblRapid: ENSACYG00000005814
LinkDB
Position
3:complement(50988774..51013053)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattactatggacaggggcatccaatgaagcctcataggatccgaatgacccac
aacttgctgctaaattatggcttgtacagaaaaatggaaatttaccgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcagatgcagagatttaacgttggagaagat
tgtcctgtgtttgatggcctgtttgagttttgtcagctatcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaactgggctggaggtctt
caccatgctaagaagtcagaggcatctggtttctgttatgttaatgatatcgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggaccttagggacattggtgctggaaagggc
aaatactatgccgtcaactttccaatgagggatggtatagatgatgaatcatatggacaa
atattcaaaccaattatatccaaagtaatggagatgtatcagcccagtgctgtggtatta
cagtgcggagcggattcattgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagtcgtaaagacttttaacttgccattgctgatgttagga
ggaggtggatatactattcgcaacgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccgtacaatgattactttgagtattttggacca
gactttaagcttcatattagtccatcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttgtttgaaaacttacgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataaacgcatagcctgtgacgaagag
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataaaaaa
ggagcaaagaaagccaggatagaagaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacggacaccaaaggagca
aaatcagaacagctcagcaatccttga

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