Cygnus atratus (black swan): 118244120
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Entry
118244120 CDS
T09349
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
cata
Cygnus atratus (black swan)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
118244120
NCBI-ProteinID:
XP_035394791
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Position
3:complement(51927467..51934848)
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AA seq
677 aa
AA seq
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MHLQISLLLLFCLNIVHGSDGYFSERYQKQSSIKGPHFLPFNVKSQGVQIRGEQGPPGPP
GPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSAVGKPGMPGLPGKPGEKGLNGEKGE
AGPVGLPGARGPQGPPGIPGPAGLSVPGKPGPQGPPGAQGPRGLPGEKGEPGIPGINGQK
GESGFGVPGRPGNRGLPGPQGPQGLPGPAGIGKPGENGLPGQPGMKGDRGLPGARGATGI
PGPQGPPGEPGEAGIGKPGPMGPPGAAGIPGAKGHPGPAGLPGSPGLPGFGKPGLPGMKG
HRGPEGPPGLPGPKGDQGPAGVPGEPGPAGSPGNMGPQGLKGLPGENGLPGPKGDMGPAG
PAGFPGAKGEKGLPGLDGKPGYPGEPGLAGPKGHPGLPGPKGDTGHAGLPGLPGPMGPQG
VKGLPGINGEPGPRGPSGIPGIRGPIGPPGMPGAPGAKGEPGAPGLPGPAGIATKGLSGP
MGPPGPPGPKGNNGEPGLPGPPGPPGPPGQAVIPQMPEGYVKAGESRELSGMSFMKAGVN
QALTGMPVSAFSVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRTPGLYYFSYHV
HAKGTNVWVALYKNGSPIMYTYDEYQKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLY
SSDYVHSSFSGFLFAQI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaaatatccttactgctgctgttttgcctaaacatagtccatggtagtgat
ggatatttttctgagcgatatcagaaacaatccagcatcaaggggccacattttctacca
ttcaatgtaaagagtcaaggtgtacagataagaggtgaacaaggaccccccggtccccca
ggccctattggaccaagaggacaaccaggtcctgcaggaaaaccagggtttggaagtcct
ggaccccaaggtccccctggtcccccaggaccacctggattctctgctgttggaaagcca
ggaatgccaggtctaccagggaagccaggagagaaaggattaaatggtgaaaaaggagaa
gctggacctgttgggctcccaggagcaagagggccacaaggaccccctggcattcctggc
cctgcaggactgtctgtccctggcaagccaggaccacaaggccctccaggagctcaaggt
ccacggggcctccctggtgagaagggagagccaggtattcctggtataaatggacaaaag
ggagaaagtgggtttggtgttccaggccgcccaggtaacaggggtcttccaggcccgcag
ggacctcaaggcctcccaggtcctgctgggatagggaagcctggagaaaatggtcttcca
ggtcaaccaggtatgaaaggtgacagaggtctgcctggtgcacgtggagcaactggtatc
ccaggtccgcagggtccaccaggagaacctggagaagctggcatcggcaagcctggccca
atgggaccaccaggagcagcaggcatccctggagccaaaggacaccctggacctgcaggc
ttgcctggatccccaggtcttccaggatttggaaagccaggattgccagggatgaaggga
cacagagggcctgaaggacctcctggccttccaggacctaaaggagatcaaggcccagct
ggtgtgccgggagaaccaggtcctgctgggtcaccagggaacatgggcccccaaggactc
aaaggcttgcccggtgagaacggcctgcccggacccaaaggtgacatgggccctgcaggc
cctgcaggattcccaggagccaagggtgaaaaaggtttaccaggattagatggaaaacca
ggatacccaggtgagccgggtctcgctggtcctaagggacacccgggtctcccaggtcca
aaaggcgacactggccatgctgggctacctggcctgcccggtccaatgggcccacaagga
gttaagggactgccaggcatcaatggtgaaccaggacccagaggaccttcaggaattcct
gggatcagaggccccatcggtccccctggcatgccaggagcccctggtgctaaaggtgag
ccaggagcaccaggactgccaggcccagcaggtattgctacaaaaggcttaagtggaccc
atgggaccacctggaccccctgggcctaaaggcaacaatggagagcctggcttgccaggt
cccccaggtcctcctggtccccctggccaagccgtaatcccacagatgccagaaggctat
gttaaagcaggagagtctcgagaactatcaggaatgtctttcatgaaagcaggagtaaac
caagctctcacaggaatgccagtgtctgctttcagtgtcattctctcaaaagcttaccct
ggggcaacagtccctatcaaatttgacaaaatcttgtacaataggcagcaacactatgac
cccagaacaggaatcttcacctgcaggacccctggactgtactatttctcctaccacgta
catgcaaaaggaacaaatgtttgggttgcactctacaaaaatggttcccccatcatgtac
acttatgatgaataccagaaaggataccttgaccaggcctctggcagtgctgtcatcgat
ctcatggagaatgatcaagtatggctccagctgccaaattcagaatccaatggcctctat
tcctctgactatgttcactcttctttctcaggtttcctatttgctcagatctaa
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