KEGG   Cygnus atratus (black swan): 118246198
Entry
118246198         CDS       T09349                                 
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cata00536]
    118246198 (COL13A1)
Glycosaminoglycan binding proteins [BR:cata00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   118246198 (COL13A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 118246198
NCBI-ProteinID: XP_050567979
EnsemblRapid: ENSACYG00000009563
LinkDB
Position
7:complement(25227239..25286181)
AA seq 598 aa
MGIPGRPGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQKGEMGAAGPR
GQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTLKGEQGQAGIQGPPGPPGPPGP
SGPAGPEGTPGQPGPIGPPGRVGEPGKPGRDGKGLPGPPGPKGDPGIQGYPGRKGAPGLA
TAGMKGEPGTPGEKGQPGVPGRMGPPGLPGKRGQRGEKGRAGDPGLPGLPGLKGEKGNSE
NALAGGKGEPGPPGLPGPPGPKGEAGDVGAAGPQGEKGEPGALGEQGPTGPRGPKGEPGK
DEMMDYDGNISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRG
KPGEMGPPGPHGLPGKDGPPGIKGEPGHAGAAGQKGDKGEPGQAGSPGLDGPTGEKGERG
DQGMPGPSGLPGPIGLPGLTGEKGEPGERGDKGNPGESMSGPPGPQGPPGPPGVQGLPGP
KGEAGIDGMKGEKGVQGEKGDRGPLGLPGTPGPMGVSGPAGPKGERGSKGDPGVVGPMGP
AGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggggattcctggacggccgggtgctccaggagaagcaggcatgtccatcatcgggccc
cgcggtccacccggacagcctggaactagaggttttcctggattcccgggccctattggc
ttagacggcaaaccgggtcatcctggacagaagggggagatgggtgctgcaggtcccagg
ggacaaccaggacccccaggacaaaaaggagaaaagggtcagtgtgcggagtacccccac
agggaatacctaagcaccaccctcgcagccctgcgctctaaccagatccttacgctgaag
ggcgaacaaggacaagcgggaatccaaggtcccccggggccccctggcccgccagggccc
tctggaccggctggacctgagggaacaccaggacagcccgggccaattgggccacctggc
cgagtgggagaaccggggaaacctggcagagatggaaagggcttacctgggcctcctgga
ccaaagggagaccctgggattcagggataccccggcagaaagggtgcccctgggttggcc
accgccgggatgaagggtgagcctgggactccaggagaaaagggacagcctggagtccca
gggaggatgggccccccaggtttgccagggaaaagggggcagcggggggagaagggacga
gctggtgaccctggacttcccggactccctggcctgaagggcgagaagggaaatagtgag
aatgccttggcaggaggtaaaggggaacctggccccccaggtctgcctgggccccctgga
ccaaagggagaagctggtgatgttggcgctgcaggaccgcagggggaaaagggggagcct
ggtgcactgggagagcagggacccacgggcccacggggccccaaaggagagcctgggaag
gatgaaatgatggactacgatggcaacatcagtgaagctctccaggaaatacgaactttg
gccttgatgggaccaccaggacttccgggtgtggctggacctccagggccaccaggacag
aagggtgaaattggcttgccaggtcctccaggccatgatggagaaaaggggccacggggc
aagccaggagaaatgggtccccctggccctcatgggctgccaggaaaggatggacctcct
gggataaagggagagccaggccatgctggggctgcaggacaaaagggggataaaggagag
ccaggacaagccggctcaccgggtcttgatggccccactggagagaaaggcgaacgaggt
gaccaagggatgccaggaccatcaggattgccgggtcccattggacttccaggattgaca
ggagagaagggcgagcctggggagcgtggagacaaaggaaacccaggagaatcgatgtct
ggcccccctggacctcaaggaccaccaggacctccgggtgttcagggcctcccgggaccg
aagggggaagcagggattgatggaatgaaaggagagaagggtgtccagggtgaaaaagga
gacagagggccactgggattacccggtactccaggaccaatgggggtttcaggaccagca
ggaccaaaaggagaaaggggcagtaaaggagatcctggtgttgtaggaccaatgggacca
gcaggacttcctggtttacaaggtctgcctggtgacaaaggaatccggggggagaggggc
aagaaaggctctagagggtctaaaggggataagggagaccaaggagcgcctggattagat
gcaccctgtccgttgggagaagatggcctcccggttcaaggctgctggaacaagtga

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