Chlamydia avium: M832_06450
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Entry
M832_06450 CDS
T03069
Name
(GenBank) hypothetical protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cav
Chlamydia avium
Pathway
cav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M832_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cav03400
]
M832_06450
Enzymes [BR:
cav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M832_06450
DNA repair and recombination proteins [BR:
cav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
M832_06450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
ResIII
CarD_TRCF_RID
ERCC3_RAD25_C
DUF3638
RecG_dom3_C
AAA_19
ADDB_N
GpA_ATPase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHK63508
UniProt:
W8JRN5
LinkDB
All DBs
Position
706045..707907
Genome browser
AA seq
620 aa
AA seq
DB search
METDYLVIEYADRARLYVPSDQAYLISRYVGASEKTPELHNLNGSKWKRSRDLSEKSLIL
YAEKLLQLEAQRSTSAAFTYPPHGEEVIKFEESFPYEETPDQLKAIEQIYSDMMSDKLMD
RLICGDAGFGKTEVIMRAAVKTVCDGHRQVIVMVPTTILATQHYETFTQRMAGLPINIAV
LSRFSDNKTTKKIFEGVSNGDIDILIGTHKLINKNLEFKNPGLLVIDEEQRFGVKVKDFL
KERYPTVNCLTVSATPIPRTLYMSLSGARDLSLITMPPLDRLPVSTFVLEYSDETLTAAL
RHELLRGGQAYVIHNRIESIFRLANTIRSLIPEARIAVAHGQMSSEELAVIFQKFKDQQI
NILVATALIENGIDIPNANTILVDQADKFGMADLYQMKGRVGRWNRKAYCYFLVSHLDRL
SSPAAKRLEALNKQEYGGGMKIALHDLEIRGAGNILGTDQSGHISAIGFNLYCKLLKKAV
AALKNNSSPLLFNDDVKIEFPYNSRIPDTYIELASMRIEFYQKIGNAENVEQLSCIQEEM
RDRFGPLPDEVLWLFALAKIRIFSLERNITSIKGTSNALYIQQYQEKTEKIKKVLPYSLS
PTPELLVSEVLESLEKAFPT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
attgaaacagactatcttgtgattgaatatgcggatcgtgcaagactttatgtaccttct
gatcaggcttatttaatttctcgttatgtaggggcttctgaaaaaactcccgagttacac
aatcttaacggctctaaatggaaaagatctcgcgatctgtctgaaaagtctcttattctt
tatgccgaaaaacttcttcaacttgaagctcaacgttcgacatcagcggcatttacctac
cctcctcatggagaagaagtcataaaatttgaagaaagcttcccctacgaagaaactcct
gatcaattaaaagctattgaacaaatttacagtgacatgatgtcggataaacttatggat
cgcctcatttgtggtgatgctggatttggaaagaccgaagttatcatgcgtgctgctgta
aaaactgtttgtgacggtcatcgtcaagtgattgtcatggtcccaacaacaattctagca
acccaacattacgaaacattcacccaacgcatggcagggctgcctataaatatcgcagtc
ctatctcgcttttcagacaacaagacaacaaaaaaaatatttgaaggcgtgtctaatgga
gatattgatatcctcattggcacacataaacttatcaacaagaatttggaatttaaaaat
cctggcttgcttgtcattgatgaagaacaacggtttggtgttaaagtaaaagacttttta
aaagagcgctatcctaccgtaaattgtctcactgtatctgcaacacctattcccagaact
ctatacatgtcattatcaggagcccgtgatctttctcttatcactatgcctcccttggat
agacttcctgttagcacattcgttttagaatatagtgatgaaacgttaacggctgcttta
cgccatgagctactccgtggtgggcaagcctatgtaatccataatcggatagaaagtatt
tttagattagcaaacaccattcgctcgttaattcctgaagcacgtattgctgttgcccat
ggccaaatgtcgtcagaagaactcgctgttatttttcagaaattcaaagatcaacaaatc
aatattcttgtagctactgcattaattgaaaacgggatcgatattcccaatgccaatact
attctagttgaccaagcagataaatttggtatggctgacttatatcaaatgaaaggacgt
gtaggaagatggaaccgaaaagcttattgttactttttagtatcacatttagacaggcta
tctagccctgctgctaagcgcttggaagccctcaataaacaagaatatgggggagggatg
aaaatcgctctacatgatttggaaattcgaggagcggggaacatcttgggaaccgatcaa
tcggggcacattagcgctataggattcaatttatattgtaaattattaaaaaaggccgta
gctgcattaaaaaacaactcatccccactattatttaacgatgatgtaaaaattgaattc
ccctataactctcgtattcctgatacctatatagagttagcatcgatgcgtatagagttc
tatcaaaaaataggcaatgcggaaaatgtagaacaattatcttgtatacaagaagagatg
cgcgatcgcttcggccctcttcctgacgaagttttatggttgtttgccttagcaaaaata
cgtatattctctcttgaacgaaatattactagtatcaaagggacctcaaacgccttatat
atccaacagtaccaagaaaaaacagaaaaaattaaaaaggtattaccctattccctatca
cctactccggaattattagtatcagaagttttagaatctttagagaaagcattccccaca
taa
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