Clostridium acetobutylicum EA 2018: CEA_G1696
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Entry
CEA_G1696 CDS
T01864
Name
(GenBank) metal-dependent hydrolase of metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cay
Clostridium acetobutylicum EA 2018
Pathway
cay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEA_G1696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cay03019
]
CEA_G1696
Messenger RNA biogenesis [BR:
cay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEA_G1696
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
CFAP54_N
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ADZ20733
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Position
1830784..1832451
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AA seq
555 aa
AA seq
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MRREKDKIKIIPLGGVDEIGKNLTVIEYREEIAVIDCGLSFPDEEMFGIDLVIPDVTYLI
KNREKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVETKLKEHNLLSKVDLKV
VKPRDIIKLNSMSIEFIRQSHSIADSVAIAIHTPMGVVLHTGDFKVDYTPIDGCVADFAR
FAELGKRGVLAMMCDSTNVERPGYTMSETTVGETFNTVFTKAKGRIIVATFASNIHRIQQ
IVEAAERYNRKVAVSGRSMENIVAVAIELGYLKVKEGVLIGIDAINRYADNKIVIITTGS
QGEPMSALTRMAAQEHKKVKIQEGDMVVISANPIPGNEKLVSRVINQLFKKGAEVIYEAL
ADVHVSGHACQEELKLMHTLIKPRFFIPVHGEYRHLKQHKELATNLGMPKANVVIPEIGG
VIELTRSSIKKTDTVVAGKVFVDGLGVGDVGNIVLRDRKHLSQDGIVTVVVTIEKVSGTV
IAGPDIISRGFVYVRESEDLMEESKEIVKTALLECEEKHITEWATIKSNIKDVLRIFLYE
RTKRKPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagaaaaagataagattaaaattatacctctaggtggggtggatgaaatagga
aaaaatcttacggttatcgaatacagagaggagatagctgttatagattgcggtcttagt
tttccagatgaagaaatgttcggtatagatttagtaatacctgatgtaacttatttaata
aagaatagggaaaaggtaaagggaatatttttgactcatggacatgaagatcatattggt
gcgttgccttatgttttaaaagagttaaatgttccggtatatggtactaaacttactatt
ggaatagttgaaactaaacttaaagagcataatttgcttagtaaagttgatttaaaggta
gtaaagcctagggatataattaaactcaatagcatgtctattgaattcataagacaaagt
catagtattgcagactctgtagctattgcaatacatacacctatgggtgtagttcttcac
acaggagattttaaggtggattatacacctatagatggatgtgtagcagattttgcaaga
tttgcagagcttggcaagagaggtgttcttgctatgatgtgcgacagcactaacgtagaa
agaccaggatatactatgtcagaaactacagtgggggaaacttttaacactgtatttaca
aaggctaaaggaagaattatagttgcaacttttgcatctaatattcacagaatacagcaa
atagttgaggccgcagaacgctataatagaaaagtagcggtttcgggaagaagtatggaa
aatatagtagctgtagctattgaacttggttacctaaaagttaaggaaggtgttttaata
ggcattgatgccataaatagatacgccgataacaaaatagttataattactacaggaagc
caaggagagccaatgtctgcacttacaaggatggcagctcaggaacacaaaaaagtaaaa
atacaggaaggcgatatggtagtaatatcagctaaccctatacctggaaatgaaaagttg
gtttcaagagttataaatcaattatttaaaaaaggtgcagaagttatttatgaagctttg
gcagatgtccatgtttcaggtcacgcttgtcaagaagaacttaagctaatgcatactctt
ataaagcctagattttttataccagtccatggagaatacaggcatttaaaacagcataaa
gagctggcaaccaatttaggaatgcctaaagctaacgttgtaattccagaaatcggtggc
gttatagaattaacaagaagcagcataaagaaaaccgatactgtagttgcaggtaaagtg
tttgtagatggtcttggtgtaggtgatgtaggaaatatagttttaagagatagaaaacat
ctttcacaggatggaatagtaacagttgttgttactatagaaaaagtaagtggtactgta
attgctggacctgacattatttcaagaggatttgtgtatgtaagagaatctgaagattta
atggaggagtcaaaagaaattgtaaagacagcactgcttgaatgtgaagaaaagcacatt
acagagtgggcaactataaaatcaaacataaaggatgtattaagaatattcctttatgag
agaacaaagagaaagcctatgatacttcctataattatggaagtgtaa
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