Petrocella atlantisensis: PATL70BA_2610
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Entry
PATL70BA_2610 CDS
T05737
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PATL70BA_2610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbar03019
]
PATL70BA_2610
03009 Ribosome biogenesis [BR:
cbar03009
]
PATL70BA_2610
Enzymes [BR:
cbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PATL70BA_2610
Messenger RNA biogenesis [BR:
cbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PATL70BA_2610
Ribosome biogenesis [BR:
cbar03009
]
Prokaryotic type
rRNA helicases
PATL70BA_2610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Toprim
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VDN48512
UniProt:
A0A3P7S1F3
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All DBs
Position
1:2668936..2670474
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AA seq
512 aa
AA seq
DB search
MNNNFIDLGVDPIIVKAIEEMGFESPTNVQSRAIPHVLNHQDLVVMSKTGSGKTGAFGIP
MLQMMEADVIGPQALILTPTRELAVQVENDISLMSKYQTVTTTAVYGQHNINIEVDAIKK
GASIVVGTPGRVFDHIQRRSLPTKAIRFLVLDEADRMLDMGFIDQVVKIIKTLPKNRVTM
LFSATMPAEIQRICQAYMNEATTIALESDTKTVDAILQLYYRVEANEKRTQLDRLLKVEQ
PDSCLIFCNTRYAVDKVQAYLERKGYIVDAIHGANTQVSRMKTIDKIKKGALQIVVATDV
AARGLHIDDLSLVINYDVPIEKDSYVHRIGRTGRAGNTGKAITLATADDIMSLYEIEEHV
GSLIEETELPTDEQVREAVASATGKWVGVKPPKAHAGKDHKPSDHKSGDYKAKDHKTKDH
RSRDYKPKEYKPVVQKVMEEKAKIVHVAEPIVEKVKEKIHVPSKAVHHKKAKPEIKVETV
ILPKLGPIEFRKSSEPVKKKKFIDKIKDMLVK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaataataactttattgatttaggggtagaccctattattgtcaaggcaatagaagaa
atgggatttgaatccccaacaaacgtgcaaagcagagccataccccatgttctgaatcat
caggatttggtggttatgtcaaagaccggcagtggtaaaaccggtgcttttggaattccg
atgttgcaaatgatggaagcagacgtaatagggcctcaagcgctcatattaacgcccaca
agggaattggcggtgcaagtggaaaatgacatcagtctcatgtcaaaataccagacagtg
accacaaccgcagtctacggacaacataacattaacattgaagtggatgcgatcaaaaaa
ggtgcatccattgttgttggaacgccgggacgggtatttgaccacattcaacgaagaagc
ttaccgaccaaagcaatacgatttcttgtactagacgaggctgaccgtatgttggatatg
ggctttattgaccaagtcgtcaaaattattaaaaccttgcccaaaaatcgtgtgaccatg
cttttttcagcaaccatgccggctgagattcagagaatatgtcaggcttatatgaatgaa
gccacgaccatagctttagaatcggacacaaaaacggtggatgctatcttacaattgtat
tatagagtagaagcaaatgaaaaaagaacacagttggatcgattactaaaagttgaacaa
ccggatagttgtctgattttttgcaacacccgttatgctgtagacaaagtacaagcctat
ctagaaagaaaaggctatattgttgacgccatccatggcgctaatacacaagtcagtcgt
atgaagaccatagataagattaaaaaaggtgcacttcaaattgtggttgcaacggacgtt
gctgcaagaggtttgcatattgatgatcttagtctggttattaactacgatgtacctatt
gaaaaagacagctacgtacaccgtatcggtcgaaccggtcgtgcaggtaacaccggtaaa
gccattacactagcaacagccgatgatattatgtctttatatgagattgaagagcatgtg
ggtagcctgattgaagaaacagaattacctacagatgagcaagtgcgtgaagcggtggct
tctgcaacaggtaaatgggtcggcgttaaacctcctaaagcccatgcaggcaaggaccat
aagccaagtgaccataaatcaggagattataaagcaaaagatcataaaacaaaagaccat
cgatcaagagactataagccaaaagagtataaacctgtggtgcaaaaggtcatggaagaa
aaagccaagattgtccatgtggcagagccaattgtggaaaaagtcaaagaaaaaatccat
gttccaagtaaggcagttcatcataaaaaggctaagcctgagataaaagtagaaaccgtt
attttacctaagcttggaccgattgagtttagaaaatcttctgaaccggttaagaaaaag
aagtttattgacaagataaaagatatgcttgtcaaataa
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