Clostridium botulinum B1 Okra: CLD_1809
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Entry
CLD_1809 CDS
T00671
Name
(GenBank) AP endonuclease, family 2
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLD_1809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_1809
Enzymes [BR:
cbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CLD_1809
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CLD_1809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CHB_HEX_C
Motif
Other DBs
NCBI-ProteinID:
ACA44521
UniProt:
B1IKH7
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All DBs
Position
2940752..2941570
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AA seq
272 aa
AA seq
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MDRLLFGISGLPIGDGTTKFNYKSGITYLNNIGLDAMELPFVRSVNVTDKNKEGILEEKN
NNNFYLSAHGSYFINLNADELEKQEKSIERIIKGAEGLKKVQGRSLIFHPGFYLKDSKEE
TFTTILENLKKLPDLGVNYRLETTGKGTQFGSLEENVALCKEVDTCKLCIDFAHIHARSN
GGLKSYKDFYNILSYVEKNLGRSALDDMHIHLAGIHYSEKGERNHLPFEESDFNYIACLK
AFKDFDIKGCVICESPILEKDALLLKNSYYEL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggacagattactttttggaatatccggcctacctataggcgatggaactactaaattt
aattataaatcaggaataacatacttaaataatataggcttagatgccatggaattaccc
tttgtaagatctgttaatgttacagataaaaacaaagaaggcatattagaggaaaaaaat
aataataatttttatttgtctgcccatggttcctactttataaatctaaacgcagatgaa
ctagagaaacaagaaaaatctatagaaagaataataaaaggtgccgagggtttaaaaaag
gttcagggaagaagtttaatatttcaccctggattttatcttaaggattctaaggaagaa
acttttacaactattttagaaaacttaaaaaaattaccggatttaggagtaaactatagg
ttggaaactactgggaaaggaactcaatttggttccttagaagaaaatgtagccttgtgt
aaagaagttgacacttgcaaattatgtatagactttgctcatatacatgctaggtctaat
ggtggtttaaaaagctataaagatttttataatatattaagttatgtagaaaaaaatcta
ggaagatctgctttagatgatatgcatatccatcttgctggaatacattatagtgaaaaa
ggtgaaagaaaccatcttccttttgaagaaagcgactttaactatattgcttgccttaaa
gcttttaaagattttgatattaaaggttgtgtaatatgtgaaagtccaatacttgaaaag
gatgctcttcttcttaaaaattcatattacgaactttaa
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