KEGG   Clostridium botulinum F Langeland: CLI_2708
Entry
CLI_2708          CDS       T00563                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cbf  Clostridium botulinum F Langeland
Pathway
cbf02020  Two-component system
cbf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cbf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CLI_2708 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CLI_2708 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbf03021]
    CLI_2708 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cbf02035]
    CLI_2708 (fliA)
Transcription machinery [BR:cbf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CLI_2708 (fliA)
Bacterial motility proteins [BR:cbf02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CLI_2708 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 UPF0122 Sigma70_ECF PCI Phage_terminase HTH_Tnp_4
Other DBs
NCBI-ProteinID: ABS39754
UniProt: A7GGN2
LinkDB
Position
complement(2841761..2842489)
AA seq 242 aa
MAIADNNSYVKEEIVKKYIPLVKYIASRVIIGKTKYIEYEDLVSYGMIGLMDALNKFDES
KGMKFSTYASIRIKGSMIDELRRNSPISKGAMDKLNRYNEAIEKLQKKLNKEPNLIQIAG
ELNISLKEVSEIENYINYISVISLEDLIFSSEDEVPLIGTIKDEKSPSPEKHVEENEQLD
YLAKAIELLNEKDRLVVTLYYYEELTLKEIGKILNVSESRVCQLHSRAIIHLKKAMAKLK
YN
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcaatagctgataataattcatatgttaaagaagagatagtaaaaaaatatattcct
ttggttaaatatatagcctctagggtcataattggtaaaactaaatatatagaatatgag
gacttagttagctatggtatgattggacttatggatgctttaaataagtttgatgaatct
aaaggaatgaaattctctacttatgcatccataagaataaagggttctatgatagatgaa
ttgagaagaaatagccccatatccaaaggggctatggacaaattaaatagatataatgaa
gctatagagaaacttcaaaagaaattaaacaaagagccaaatttaatacaaatagcaggg
gagttaaacatatctttaaaagaagtaagtgaaattgaaaattatataaattatatatca
gtaatttctctagaggatttaatattttcgtcagaagatgaggtaccacttataggaact
ataaaagatgaaaaaagtccaagcccagaaaaacatgtggaagaaaatgaacagttagat
tatttagctaaagctatagaacttctcaatgaaaaagataggctagtagtaactctgtat
tattatgaagaactaactttaaaagaaataggaaaaatattaaatgtatctgaatctaga
gtgtgtcaacttcatagcagagctataatccatctaaagaaagctatggccaagctaaaa
tataattaa

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