Clostridium botulinum H04402 065: H04402_03540
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Entry
H04402_03540 CDS
T02076
Name
(GenBank) transcriptional regulator BkdR of isoleucine and valine catabolism operon
Organism
cbj
Clostridium botulinum H04402 065
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_9
PAS_8
PAS_4
HTH_50
PTS-HPr
GdpP_PAS
PAS_10
AAA_5
AAA_2
AAA
dCache_1
HTH_8
PAS_7
AAA_16
Sigma70_r4
AAA_7
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CBZ05338
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Position
3710895..3712904
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AA seq
669 aa
AA seq
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MYKNNIVVPINNGIHTRIAAMIVHKATEIKNKYDLDLYIKRMDSREPLAISMLALISLKI
KQHEIIEISCNSDSSKAESAVLELCNFINYDISKENPTSKLDDIIEENTIAYDQIFTNIP
IGILVIDKNSKITMANDYSLKIIGYSLKDILGKNIKDIIPSSELPDIIKNKCYHKGKTQY
MDNRILITNRSPIYFNDKILGAISVFQDVSELVGIKELNEKFKKILEASHDLICFVDEDG
KIIYVNPSYKKHFSINSKDIIGKDIKESHPNSLIMEVFNTKRPKENVIYNKDNINIISTI
EPIFIDNEFKGVISISKTVDELRDLTLKLTESEEKLMYYKNELTRHLPLSSSFKSIIGWN
SSLKDCLSIAEKASKSTSTVLVRGESGTGKEIIANAIHDNSPRKNRSFVRVNCAAIPENL
LESELFGFEKGAFTGAIKKKPGKFNIADGGTIFLDEIGDLPISMQVKLLRVLQEKEFESI
GGIKTQRVDVRIIAATNRNLEDMIKNNTFREDLYYRLNVLNISLPPLRHRKQDINLLVEH
FINKINPKLNKNIAGINKEALLKLQQYDWPGNIRELENIVERAMNMCDKSIITVKDLPFY
ISNNSFDDSYNFTINEDNLKTLEEYEKEIITLAMKKYKSFNRAGKALGVTHRTVSLKCKK
YNISPEIYK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaataatatagtagttcctattaataatggcatacatacgagaatagctgcc
atgatagttcataaagctacagaaataaaaaataaatatgatctagacctctatataaaa
aggatggattctagagaacctttagctattagtatgttagctctgatttctttaaaaata
aaacaacatgaaataatagaaatatcctgcaatagtgattcttctaaagctgaaagtgca
gttttggaattatgcaattttatcaattatgacatatcaaaggaaaatcctacatcaaaa
ctagatgacattatagaggaaaacactatagcctatgatcaaatatttactaatattcct
ataggtatattggtaatagataaaaatagcaagattaccatggctaatgactattcatta
aaaattataggatattctttaaaggatatattaggtaaaaacattaaggatataatacca
agttctgagttgcctgatataattaaaaataaatgctatcataaaggtaaaacacaatac
atggacaatagaatattaataaccaatagatcccctatatattttaatgataaaatttta
ggcgctataagtgtatttcaagatgtttctgaacttgtaggcataaaagagctaaacgaa
aaatttaaaaaaatattagaagcctcccatgatttaatttgttttgtagatgaggatggt
aaaataatatatgttaatccctcctacaaaaaacatttttctataaattctaaagatatt
attggtaaagatataaaagaatcccatccaaatagtcttataatggaggtatttaatact
aaaagaccaaaggaaaatgtaatctataataaggataatataaatattatatctactata
gaacctatttttattgataatgaatttaaaggtgtaatctctatatctaaaactgtagat
gaattaagagatctaactttaaaacttacggaatctgaagaaaaacttatgtactataaa
aatgaattaaccagacatcttcccttaagttcttcctttaagtctataataggttggaat
agttccttaaaagattgcttatccatagcagaaaaagcttctaaatcaacttctactgtt
cttgttagaggagaaagtggcaccggaaaagaaattatagctaatgctatacacgataat
agtcctagaaaaaatagatcttttgttagagtaaactgtgcagccataccagagaatctt
ttagaaagtgaactttttggttttgaaaaaggagcctttacaggagctataaaaaagaaa
cctggtaaatttaatattgcagatggaggtacaatctttttagatgaaataggtgatcta
cctatttctatgcaggtaaaactgttaagagttcttcaagaaaaagagtttgaaagtata
ggaggaatcaaaactcaaagggtagatgttagaataattgctgctactaatagaaactta
gaagatatgattaaaaataataccttcagagaagacctttattatagactaaatgtttta
aatatatctttgccccctcttcgtcatagaaagcaagatataaatcttttggtagaacac
tttataaataaaattaatcctaaacttaataaaaacatagcaggtataaataaagaagcc
cttttaaaattacaacagtatgattggcctggaaatatacgcgaattggaaaatatcgtt
gaaagggctatgaatatgtgtgataaatctataataactgttaaagatttacctttttat
atatctaataactcttttgatgatagctataactttactataaatgaagacaacttaaaa
acactagaagaatatgaaaaagaaataattactttagctatgaaaaaatacaaaagtttt
aatagggcaggtaaagccctaggcgtaactcacagaacagtgtctctaaaatgtaaaaaa
tataatataagtccagaaatttataaatag
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