Campylobacter blaseri: CBLAS_0031
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Entry
CBLAS_0031 CDS
T06820
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cbla
Campylobacter blaseri
Pathway
cbla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBLAS_0031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbla03019
]
CBLAS_0031
Enzymes [BR:
cbla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBLAS_0031
Messenger RNA biogenesis [BR:
cbla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBLAS_0031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKF85248
LinkDB
All DBs
Position
complement(29153..30556)
Genome browser
AA seq
467 aa
AA seq
DB search
MLIQDLNLIQPIQKALISEGYTNATPIQEKAIPELLKGRDLLGCAQTGTGKTAAFSIPIL
QSIATKQKTKGKKSTKALIIAPTRELVVQISNSLKAYGKNLELSTTAIYGGVDQRPQTRM
LAKGVEIIVATPGRLLDLVNQRFIDLSMVEHFVLDEADMMLDMGMLEDVKKIIQYLPKDK
QTILFSATMPSQIERLANNILNDPLKIVVKPTTSTLDQISQEFYYVDRDNKSNLLIKLLE
DKDIFSAIVFSKTKHGADKIVKQLKNLGIMADAIHGDKSQSARQFALNKFKQKRTRVLVA
TDIAARGIDVSELSHVINYDLPEVAETYVHRIGRTGRASNEGTAISFCCHAEKPLLASIK
KLTGRPIVEITGHDFPLMDRSYEEKRGRGKRSTSKSNYSNDTRKTTSSRDNSSSKKRKFN
SNKSDFFDEGGRDDRKFNSRKSNSRDYASRKDESRSSRSRNYRETSY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgttaatacaagatttaaatttaatacagccaattcagaaggctttaatctctgaagga
tacacaaacgcaacacctatacaagaaaaagcaattccagaactcctaaaaggtagagac
ctacttggttgtgcacaaacaggtacaggcaaaactgcggctttttctatacctatttta
caatcaattgcaacaaagcaaaaaacaaaaggtaaaaaaagtactaaagctttaattata
gcacctacaagagagttagttgttcaaatttctaatagcttaaaagcttatggtaaaaac
ttagaactaagtacaactgcaatttatggcggggtagatcaaagaccacaaactagaatg
cttgcaaaaggtgtagagataatagttgcaacaccaggaagactgctagatcttgtaaat
caaagatttattgatttaagtatggttgagcattttgttttagatgaagctgatatgatg
cttgatatgggaatgcttgaagatgttaaaaaaataatccaatatctaccaaaagacaaa
cagacaattttattttcagcaacaatgcctagccaaattgaaagacttgcaaacaatatc
ttaaatgatccattaaaaattgttgtaaaacctacaacttcaacactagatcaaatttca
caagaattttactatgtagatagagataataaatcaaatctgcttataaaacttcttgaa
gataaggatatattttctgcgattgtattttcaaaaacaaaacatggtgctgataaaatc
gttaaacaattaaaaaatttaggaattatggctgatgcaattcatggtgataaatctcaa
agtgctagacaatttgcacttaataaattcaagcaaaaaagaacaagagttctagttgca
actgatatagcagcacgtggaattgatgttagcgaattatctcatgttataaattatgat
cttccagaagttgctgaaacttatgtccacagaataggaagaacaggtagagcaagcaac
gaaggaacggcaattagcttttgttgtcatgcagaaaaacctcttttagcaagcattaaa
aaactaacaggaagacctattgtagagattacggggcatgattttcctttaatggataga
tcatatgaagaaaaaagaggtagaggaaaaagaagtacaagtaaaagtaactattcaaac
gatacaagaaaaacaacttcaagtagggataactcttcaagtaaaaaaagaaaattcaac
tcaaataaaagtgatttttttgatgagggcggaagagatgatagaaaatttaactcaaga
aaaagtaactctagagattatgcctctagaaaagatgaatcaagaagtagtagatctcgc
aactacagagaaacttcgtattaa
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