Clostridium botulinum F 230613: CBF_3025
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Entry
CBF_3025 CDS
T01865
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbm03009
]
CBF_3025
Enzymes [BR:
cbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CBF_3025
Ribosome biogenesis [BR:
cbm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CBF_3025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PA14
Motif
Other DBs
NCBI-ProteinID:
ADG00629
LinkDB
All DBs
Position
complement(3215846..3216748)
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AA seq
300 aa
AA seq
DB search
MDNKLIFVVKKINHNIDIKDYLREMENLSGRFIRKAVRDGRVFVNKEKVIKKHKLSQDDL
IEIYMQEDEHQNIEPEDMNIEIVYEDNDIIVINKRPGIVVHPTKGHPTGTLSNGILYHFK
KNGEKSIVRLVSRLDRDTSGLIIIAKNQFSHMRLASDMSKDSFRKIYIAVVHGSMKEKEG
RINLPIYNEEESESIKRIVDERGQESITTYEVLEELSKGSVVRLELETGRTHQIRVHMSH
LGHPLYGDSLYGKGEEEKEYIERQALHAYKLEFPHPRTGDILKLQCSLPDDIKNLIEKIK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggataataaattaatttttgtagttaaaaaaattaatcataatattgatataaaagat
tatttaagggaaatggaaaacttatcaggaaggtttattaggaaagctgttagggatgga
agagtctttgttaataaagaaaaggtaataaagaaacacaaattgtcacaagatgattta
atagaaatttatatgcaagaagatgaacatcaaaatatagagccagaggatatgaatata
gaaatagtatatgaagataatgacattatagttataaacaaaaggcctggcatagtagtg
catcctactaaaggtcatcccacaggaactttatctaatggaatattatatcattttaag
aaaaatggagaaaaatctatagtaagattagttagtagattagatagagatacatctgga
ttaataataatagctaaaaatcagttttcacatatgagattagcttcagatatgagtaaa
gatagttttaggaaaatatatatagcagtagtgcacggaagtatgaaagaaaaagaagga
agaattaatttacctatatataatgaagaagaaagtgaatccattaaaagaatagtagat
gagagaggacaagaaagtataactacatatgaggttttagaggaattatccaaaggtagt
gtggttaggttagaattagaaacgggaaggactcatcagattagagtacatatgtctcat
ttggggcatcctctttatggagattctctatatggaaaaggagaagaagagaaagaatac
atagaaagacaagccttacatgcttataaattagaatttccccatcctagaacaggagat
attttaaaactacaatgtagtttaccagatgatataaagaatttaatagaaaagataaag
tag
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