Clostridium botulinum A ATCC 3502: CBO1959
Help
Entry
CBO1959 CDS
T00533
Name
(GenBank) putative sigma-54-dependent transcriptional regulator
Organism
cbo
Clostridium botulinum A ATCC 3502
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_7
PAS
Cdc6_C
HTH_12
Ribosomal_S19e
PAS_8
Motif
Other DBs
NCBI-ProteinID:
CAL83501
UniProt:
A5I384
LinkDB
All DBs
Position
complement(2089062..2091152)
Genome browser
AA seq
696 aa
AA seq
DB search
MRKLWRNHEGIMKKTMSVVALDARAGEFYAKEINELFGEYVEIASYNVSDGSAVGTLPKA
DLFVISTDAYGSAEEVARHVPIDSLTMGIEVSYRWSTLQNLSMIPKGTRALFVNMTDTMA
REAIAQLQQLGVNHIRFIPFYPGAVLEEPVDMAVTPEEERYVPQSVKKVLNIGHRSCTSG
MMIEIALRMGLEQLLETKKFQNYFQAMATNNYSFNQIYARSRRLESQFHILMEILDEGLV
GVNEKGEIFACNKKACQIAKIAENLVIGRCGEKVFPYIPFYSALKDKKEIPPKVIKLGGV
NVSIEVIPVLRQKKCIGAFATLQEFSELESKQNELRSQLLKKGYCAKYTFNDVIGESDCI
CHTKSILKRMAATESPVLIVGETGTGKELLAHAVHCASKRSKGPFIAINVAAMPENLLES
ELFGYEEGAFTGAKKGGRPGLFEFAHGGTLFLDEVEGMSQAMQVKLLRVLQEGEVMRVGG
SRILSVDVRIVAATNESLEQKVEEGSFRKDLYYRLNTLTVVVPLLQERGEDVFLLMEHFK
EELRGDFKLSEEVKDFLRQYSWPGNIRELHNTVEYFVYTGKQVIDMDDLPPTIFHDRTSR
PVNVEKKERLQEVVSPFWFVLEQLYMAAERNEFIGRDKLLLKAKKQYLLLSQKEIRDILK
DMEKKGFVKIGKGRGGSRITLKGKEYCQSRDKSLDK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattatggaggaatcatgaaggaatcatgaaaaaaacgatgtctgtagtggct
ttggatgccagagccggagagttttatgcaaaagaaatcaatgaactgtttggggaatat
gtggagatagcatcctacaatgtgagtgacgggtctgccgtgggaacgttgccaaaggca
gatttatttgtgatttcaacagatgcatatggttccgcagaagaggtggcccgccatgtt
cctatagacagccttaccatgggaattgaagtttcctaccggtggagtacgttgcaaaac
cttagtatgataccaaagggaacccgagctctttttgtaaatatgacagataccatggct
cgagaggctattgcacagctgcaacagctgggggtaaaccatattcgttttattccattt
tacccaggtgctgttttggaagagccggtggatatggctgtaacgccagaggaggagaga
tatgtacctcagagcgtaaagaaagttttaaatatcggacaccgttcctgtacctcggga
atgatgatcgagattgccttgcgtatgggacttgaacagttgttagagacgaaaaaattc
caaaattatttccaggcgatggcaacgaataattacagctttaatcagatatatgcccgc
tctagaagactggaaagccaattccatattttaatggaaatattggatgagggattggta
ggcgttaatgaaaagggggagatttttgcatgcaataagaaagcctgccagattgcaaaa
attgcggaaaatcttgttattggcaggtgcggggaaaaagtatttccctatattcccttt
tacagtgcattgaaggataagaaagaaattccgcctaaagtgattaagctgggtggcgta
aacgtaagtattgaagttataccggttctgcggcagaagaaatgcatcggtgcatttgct
accctacaggaatttagtgagctggaatccaaacagaatgagttaagaagccagcttcta
aaaaagggttattgtgccaagtatacctttaatgatgtaatcggagaatcagattgtatc
tgccatacaaagagtattttgaaacggatggcggctaccgaaagtccagttttaattgta
ggtgaaacaggaacgggaaaagaactgctggctcatgcggtgcattgtgcatctaagcga
agcaaaggtccttttattgccattaatgtggcagccatgccggaaaatcttctggaaagc
gagcttttcggctatgaagagggcgcatttaccggtgcgaaaaaaggcggacgccctggg
ctgtttgaatttgcccatggtggtaccttattcctcgatgaagtagaaggtatgagccag
gctatgcaggtaaagcttctgagagttctgcaggaaggcgaagtcatgcgtgtaggtggc
agcagaatcctaagtgttgatgttagaattgttgcagcaaccaatgaatctttggagcag
aaggtggaggaaggaagcttccgaaaggatctgtattatcgtctgaatactttgacggtt
gtagtaccgctgttacaggaacggggagaggatgtctttcttttgatggagcattttaaa
gaggagctccggggtgactttaagttatcggaggaagtgaaagactttctgcgtcagtat
tcctggccgggaaatatccgggaactgcataacacagtggaatattttgtttataccggg
aaacaggtgattgatatggatgatttaccgcctactattttccatgaccggacatccaga
ccggtgaatgtggagaagaaggagagactgcaggaggtggtttcgcccttctggtttgtt
ctggaacagctttatatggcagcagagaggaatgagtttatcggaagggataagttgctg
ttgaaggcgaagaagcagtatcttctattgtcccaaaaggagattcgggatattttaaag
gatatggagaaaaaaggtttcgtaaaaatcggaaaaggaagaggcggcagcaggattacc
ttgaaggggaaggaatactgtcagagtcgggataagtctttggataagtag
DBGET
integrated database retrieval system
