Candidatus Viadribacter manganicus: ATE48_00995
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Entry
ATE48_00995 CDS
T04422
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot03410
Base excision repair
cbot03430
Mismatch repair
cbot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATE48_00995
03430 Mismatch repair
ATE48_00995
03440 Homologous recombination
ATE48_00995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_00995
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ATE48_00995
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ATE48_00995
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ATE48_00995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
ANP44597
UniProt:
A0A1B1ADG2
LinkDB
All DBs
Position
complement(186615..188408)
Genome browser
AA seq
597 aa
AA seq
DB search
MSAARKLETGGAFLGVERSLTGRRWRTREADLGLVEAFRRQFSLPEIAARLMAARGIGLE
DAEAFLFPTLKTHFPDPSSFADMDEAARVIEDAIVAGRSCAVFADYDVDGGSSGAQLVRY
FRARGRDLKIYVPDRMKEGYGPSALAFERLKAEGVDLVITVDCGAAAEGPLNAAAQIGLE
VVVLDHHLMGGPPPKARAVVNPNRLDDTSGQGALTAAGVVLVTLAAVNREARRRGSPGSN
HLPDIIQMLDLAAIGTVCDVAPLTGFNRAIVSQGLKILRNGKNIGMVALAESAGRKGSAT
VYDFGFILGPRINAGGRVGDASLATRLLSTEDPEEARELAATLEALNAERRQREAEMLAE
AETAAIAEAEHRSVIIVGSHRWHPGVIGIAAGRLKDRLHKPTIVLGGVSEHEPAKGSGRS
TPGVNLGAAVAAAKEAGLLINGGGHAAAAGLTVEWDKVEALKEFLSERLAGELAAAAGEA
RALTVDAMSGVGAVDVALIDALEQIGPYGQGHPEPVLALTDVRVSFAKLVKDEHVRFTLE
DARGARVSGIAFRAMKSPLGEALMKKDVIYHAAVRVKRNEWNGNVRAEVEIVDLAEA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcaagaaagttagaaacgggcggcgcattccttggtgtcgagcgatcgctc
accggcaggcgctggcgcacgcgcgaagctgatctcggcttggtggaagcattcaggcgg
cagttttcgttgcccgagatcgccgcgcgattgatggcggcgcgcggtattggccttgag
gacgcggaagccttcctcttcccgactctgaagacgcattttcccgatccgtcgagtttc
gctgacatggatgaggcggcgcgtgtcatcgaggatgcgatcgtcgcgggccgctcatgt
gcggtgtttgcagactacgatgtcgacggcggttccagcggtgcgcaactcgtgagatat
ttccgcgcgcgcggtcgcgatctcaaaatttacgtgccggatcggatgaaggagggctac
ggcccctctgctctggcattcgaacgactgaaggcggaaggcgttgatctcgtcatcacg
gttgattgcggcgccgcagctgaagggccgttgaacgccgccgcgcagattggcctcgaa
gttgttgttcttgaccaccacctgatgggcggcccgccaccgaaagctcgcgcggtggtc
aatccgaacagattggatgacacttccgggcagggcgcgctcacagccgctggcgtcgtg
ctcgtcacgctggctgcagtgaatcgcgaagcgcgtcgtcgcggttcacccggttcgaac
catcttcccgatatcatccagatgttggatctcgccgccatcggcaccgtttgtgatgtt
gcccctttgacgggcttcaatcgggcgatcgtgtcccaaggcctcaagattttgcgcaac
ggcaagaatattggcatggtggcgctcgcggagagcgccggccgcaaaggttcagccacg
gtctacgattttggcttcattttgggtccacgcatcaatgcaggtggtcgcgtcggtgac
gcatcgctcgcaacgcgtcttctatcgactgaggatccggaagaggcccgtgagctcgct
gcaacgctcgaggcgcttaatgcggagcggcgccagcgcgaagccgaaatgctcgcggaa
gccgagacggccgcaatagcggaagccgaacatcgttcggtcatcatcgttggctcgcat
cgctggcacccgggcgtgatcggcatcgccgccggccgtttgaaggaccggcttcacaaa
ccaacgatcgtgcttggcggcgtcagcgaacacgaaccggccaagggctccggtcgctcg
acgccgggcgtcaacctcggcgcggcggttgccgcggccaaagaggcgggtttgttgatc
aatggtggtgggcacgcagctgcggcgggcctcaccgtggaatgggacaaggtcgaagct
ctaaaggaatttctctccgagcggcttgcaggagaactcgcagctgcggccggtgaggcg
cgcgcgcttaccgtggatgcgatgagtggcgtgggcgcggtggacgtcgcgttgatcgac
gcgctcgagcagataggaccctatggccaaggtcaccccgagccggtgttggcgctgacc
gacgtaagggtatccttcgcgaaactcgtgaaggacgaacacgtccgcttcaccttggag
gacgcacgcggcgcccgggtcagcggcatcgcatttcgcgcgatgaagagcccccttggc
gaagcgctgatgaagaaagacgtgatctaccacgccgcggtgcgggtgaagcgcaatgag
tggaacggcaacgtccgcgccgaggtggaaatcgtcgatttggccgaggcctag
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