Candidatus Viadribacter manganicus: ATE48_11110
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Entry
ATE48_11110 CDS
T04422
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbot03016
]
ATE48_11110
Enzymes [BR:
cbot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ATE48_11110
Transfer RNA biogenesis [BR:
cbot03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ATE48_11110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
ANP46426
UniProt:
A0A1B1AIN5
LinkDB
All DBs
Position
2153845..2154393
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AA seq
182 aa
AA seq
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MSLRLFAALSIPDEVAERLLPLMKGVGGANWRPRENLHLTLRFFGAITEPVAEDLDGELE
AATRGIDPFELRLKGAGSFGGADPHALWIGAAESDSLKQLAAACEKAARRVKLKPEPVKF
TPHVTIAYLNGATLDRVQAFVARHGLFETPAFAVGGFGLYSSITRKSAPSLYRLEAEYPL
RG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcgtttgttcgctgctctttcaattccagatgaggtcgcggagcgcttgctg
ccgctgatgaagggtgttggcggcgccaattggcggccgcgcgagaacttgcacctgacg
ctgcgcttcttcggtgcgatcaccgagcctgtcgcggaagatctcgatggcgagttggaa
gcggcgacgcgcgggatcgatccattcgagctgcgcttgaagggcgccggttcgttcggc
ggcgccgatccgcacgcgctttggataggcgcagctgaaagcgattcattgaagcagctt
gcggcggcgtgtgagaaggcggcgcggcgcgtcaagctgaaaccggagccggtcaagttc
acgccgcacgtgacgatcgcgtatttgaacggcgcaacgcttgatcgggtgcaggcgttc
gtcgcccggcacggattgttcgagacgcctgcgttcgcggtcggcggttttgggctctat
tccagcatcacgcggaaatccgctccgagcctttatcggctcgaagcggagtatccatta
cggggttaa
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