Lawsonella clevelandensis: AL705_01245
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Entry
AL705_01245 CDS
T04080
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL705_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbq03400
]
AL705_01245
Enzymes [BR:
cbq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AL705_01245
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AL705_01245
DNA repair and recombination proteins [BR:
cbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL705_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF1748
DZR
Motif
Other DBs
NCBI-ProteinID:
ALE18568
UniProt:
A0A0M4MWV9
LinkDB
All DBs
Position
complement(278886..279779)
Genome browser
AA seq
297 aa
AA seq
DB search
MPELPEVEVVRRGLVTHLTGATLRDVDVLHPRTGRRYPGGSAALAQALEGATITAINRRG
KYLWCVLESESTDLTTSAVPVLLIHLGMSGQIIIDDGTASLRPHCRMRAHISGGRSVSFV
DQRTFGYLTIDRLIWDPRTERWIPSLAQHIAPDPLEEGFDMEVTVRELRRHRVPLKSALL
NQEIISGVGNIYADEALWAARLHGARLTSGLSYAQLTTVLTEVQAVMRRALAVGGTSFDA
LYVNTAGEPGYFARSLHSYGKAGEPCDRCGTPLVSIVLGGRSHTYCPSCQKLPVRTR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgccagaagtggaggtagtgcggcgcggacttgtcacacacctcacaggt
gccaccctgcgggatgttgacgtcctgcacccgcggactggccgccgttatcccggcgga
tccgccgcacttgcccaggccttggaaggcgccacaattacggcgatcaatcgtcgcgga
aagtacctctggtgtgtgttggagagcgagtccacggacctcactacctctgcggtcccg
gtgctcctcatccacctggggatgagcgggcagatcattatcgatgacgggacggctagc
ctgcggccccattgccgcatgcgcgcccacatcagtggcggacgcagtgttagtttcgta
gaccagcgcaccttcggctacctcaccattgataggttgatctgggatccacgcacggaa
cgatggataccctcgctggctcagcacatcgcacctgatcccctggaggaaggtttcgat
atggaggtgactgtgcgtgaactacggcgccaccgtgttcccttgaaaagtgccctactc
aaccaagagatcatctccggagtggggaacatctatgctgacgaagccctctgggcggcc
cgtctgcacggtgctcgcctgacctctggcttgagctatgcgcagctcacaactgtcctt
acggaagtccaagcagtaatgcgccgggcgctggcggtcggaggtacgtcgtttgatgca
ctgtacgttaatactgctggtgaaccggggtattttgctcgttctttgcactcttacggt
aaggctggagaaccgtgtgatcgatgcggcactcctttggtctccatagtgttgggtggc
cgctcacatacctactgtcccagttgccagaagctccctgtccgaaccaggtag
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