Citrobacter braakii: A6J81_12920
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Entry
A6J81_12920 CDS
T04825
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbra
Citrobacter braakii
Pathway
cbra00470
D-Amino acid metabolism
cbra00550
Peptidoglycan biosynthesis
cbra01100
Metabolic pathways
cbra01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A6J81_12920 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A6J81_12920 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
A6J81_12920 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbra01011
]
A6J81_12920 (ddl)
Enzymes [BR:
cbra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
A6J81_12920 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbra01011
]
Precursor biosynthesis
Amino acid ligase
A6J81_12920 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_YheCD
TTL
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ARC41550
LinkDB
All DBs
Position
complement(2642453..2643373)
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AA seq
306 aa
AA seq
DB search
MADKIAVLLGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTLLKSMGFQKVFI
ALHGRGGEDGTLQGMLEQIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDEAVTKISALGLPLIVKPSREGSSVGMSKVEEENALQGALALAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLSDETQYFCPAGLEAEQEARLQEL
VLKAWTALGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGLSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaatcgcggtcctgttagggggaacctccgcagaacgtgaagtttcgctg
aattccggcgcggccgtactggcagggttacgcgaaggtggtgttgatgcccatccggtt
gatcctaaagaggtcgatgtcactcttctgaaatctatgggttttcagaaggtgtttatt
gcgttgcatggtcgtggcggggaagatggcacgttgcagggcatgctggagcaaattggc
ctgccatataccggcagcggcgtcatggcttccgcaatttcgatggacaaactgcgcagc
aagctgctgtggcagggcgcaggtttacccgtcgcgccatgggttgcattgacccgcgct
gagttcgaaaaaggtcttagcgatgaagcagttacaaaaatttctgcgttaggtttgccg
ctgattgtgaagccaagccgtgaaggctccagcgtagggatgtcaaaagttgaagaagaa
aatgctttgcagggtgcattagcattggcttttcagcatgatgaagaagtactgattgaa
aaatggctcagtggcccggaatttacagttgcgatactcggcgaagaaattttaccgtca
atacgtatccaacccgcgggaaccttctatgattatgaggcgaagtatctctctgatgag
acacaatatttctgccctgcaggtctggaagccgaacaagaggcccgtttgcaggaatta
gtcctgaaagcatggaccgcattgggctgtaaaggttggggtcgcattgacgtcatgctg
gacagcgatggccagttttatctgctggaagccaatacctctccgggtatgaccagccac
agcctggtgccgatggcggcacgtcaggcaggcctgagcttctcgcagttggtggtaaga
attctggagttggcggactga
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