Clostridium baratii: U729_1609
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Entry
U729_1609 CDS
T03506
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbv
Clostridium baratii
Pathway
cbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U729_1609 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbv03021
]
U729_1609 (rho)
03019 Messenger RNA biogenesis [BR:
cbv03019
]
U729_1609 (rho)
Transcription machinery [BR:
cbv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
U729_1609 (rho)
Messenger RNA biogenesis [BR:
cbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
U729_1609 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_22
AAA_25
DUF5855
NACHT
AAA_18
AAA
AAA_16
AAA_14
ABC_tran
HeH
Motif
Other DBs
NCBI-ProteinID:
AIY84191
UniProt:
A0A0A7FZB2
LinkDB
All DBs
Position
1703232..1704695
Genome browser
AA seq
487 aa
AA seq
DB search
MTKEIYESMTLAKLKEIAKELEIKNISKYKKSELIDEILNKKVNTIEKDGVILKEKISPK
TRENNSYSNYSNNQNNNYNNSNNNNYNNSNNNYNNQNNYQNSNRNNNQGERNLSSAETIS
GILQIQENNSFGFLRGKNCLSSSEDVYVSPAQIRRFNLSTGDKLEGKVREPKEGEKFKAL
IYLEKVNDENPENAVKRIPFEKLTPIYPKERIRLEGNGQNDLSTRLMDIICPIGKGQRGM
IVAPPKAGKTTLLKQLAQNISKNCPEVKLIVLLIDERPEEVTDMQRSINGEVVYSTFDEE
PQNHERVAQMILEHGKRRVEQGQDVVILLDSLTRLSRAYNLTITPTGRTLSGGLDPGSLI
MPKKFFGAARNIEEGGSLTILATALVETGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIF
PAIDIYKSGTRKEDLLLSDEEREVAYSIRKVMYTDGNADKVTENLIKMLGKTKNNEEFIR
MFEKSEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaagaaatttacgaaagcatgactttagcaaaacttaaagaaattgctaaagaa
ttagaaataaagaacatatcaaaatataagaaaagtgaattgatagatgaaatattaaat
aaaaaagtaaatactatagaaaaagatggagtaattttaaaagaaaaaatatcaccaaaa
actagagaaaataatagctatagtaattattctaataatcaaaataataattataacaat
tcaaacaacaataattataataattcaaataataactacaataaccaaaataattaccaa
aattcaaatagaaacaataatcaaggtgagagaaatttatcttcagcagaaactatatca
ggaatattacaaattcaagaaaataatagctttggatttttaagaggaaagaactgttta
agtagtagtgaagatgtatatgtatcaccagctcaaataagaagatttaatttgtcaaca
ggagataagcttgaaggtaaggtaagagaaccaaaagaaggagaaaaatttaaggcttta
atttatttagaaaaagtaaacgatgaaaatcctgaaaatgcggttaagagaatacctttt
gaaaaattaactccaatatatcctaaagaaagaattagattagaaggtaacggacaaaac
gatttatcaacaagacttatggatataatatgcccaattggaaaaggtcaaagaggtatg
atagttgcaccaccaaaggcaggtaaaacaactcttttaaagcaattagctcaaaatatt
tcaaaaaattgtccagaagtaaaattaatagttttattaatagatgaaagaccagaagaa
gtaacagatatgcaaagatcaataaatggagaagttgtatattctacttttgatgaagaa
ccacaaaaccatgaaagagtagctcaaatgattttagaacatggaaaaagaagagttgag
caaggtcaagatgttgtaattcttttagatagtttaacaagattatctagagcttataac
ttaacaataacaccaacaggaagaactttatcaggcggattagatccagggtcattaata
atgcctaaaaaattttttggagcagctagaaacattgaagaaggtggaagtttaacaata
cttgcaacagctttagttgaaactggttcaagaatggatgatatgatatttgaagaattt
aaaggaacaggtaatatggaagttcatttagatagaaaacttcaagaaagaagaatattc
cctgcaattgatatatataaatcaggaacaagaaaagaagatttacttttaagcgatgaa
gagagagaagttgcatattctataagaaaagttatgtatacagatggaaatgctgataaa
gtaactgagaacttaataaaaatgcttggaaaaacaaaaaataatgaagaatttataaga
atgtttgaaaagagcgaaatataa
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