Chlamydia caviae: CCA_00272
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Entry
CCA_00272 CDS
T00125
Name
(GenBank) polymorphic outer membrane protein E/F family protein/autotransporter, putative
Organism
cca
Chlamydia caviae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AAP05023
UniProt:
Q823Y1
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Position
complement(296044..298869)
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AA seq
941 aa
AA seq
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MISDLCYPSMHPYAYPLVCLISLSICAQPLDCFAKEKKPYSFHKIPESGSACTESNFYTG
ELHNQNADVDITGRKYLCINNQYYRENGGAFTVRSLNITKNLGPIVFRENVSNDNGGAIF
STNCNITYNKQDCCFVNNMANVIIDLLASRSGGAIKSANLVISNNVGRCQFLNNTASLSG
GAILADNDINITHNYGDIILRNNKCLKDRSLGGALHSTNCSITSNHAPINFISNQSGGGG
AIYATRTCTISYNSETITFLNNCSLDQLYDSSSNWRAGGGVIYCSSCSITNNPKGLIFQN
NSAKRDAGVIFAQNLTIKDNGPILFINNSATWGGALQNHDRGQFYLSADYGDIVFKRNFC
IKSWGYTRNALHSTPNLNLQIGARQGYSIKFYDPIENEHPLSSVLTFNPESYHLGTVLFS
GADVSTNNTDINNLRSKMRNVSKIAHGVLAVEDRAVLAIYKITQDEGTLRLGNGAVITTI
QNASSPQTTAGCTLALSKLALNLPSILAKGAEAPKIWVYPTESGNNYTEDPNPTITLSGN
LSLLNDDNEDPYDSLNLSRGITRVPFLYLCDNATKKINIDALNIEAINQNAHYGYQGIWS
PYWEEYTTITNPTSVLTANTSHRLLYADWTPTGYIPNPEYRGDLVANALWQAAYNTITGL
HSTPPPRTSLGVAGRGSVAYVLQKTRNAKPGFELFSRGYSTQASRSTETNHHFALSFSQF
YSEIKEAKSQDKVSANTYFAGAQIHIPWFDENLLTSASLGYAYSHNHVKTKHHTTNALSE
GDFHSHTLGSELFCRFPEGTVSNVQFRPFIKALGIHAIQESFTETGKNSRYFQAKDPFIN
VTLPVGVYGYTEHEMHLKTCWEMQLAYTPTIYRKKPKIITTRLVSKGRWITSGTPVDHHA
VSISAKNTTTLNRMSLSINYRGDFSKSTLCNFLNITSEINF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtgatctcagatctttgttatcccagtatgcatccctacgcctatccattagtatgttta
attagcctgagtatttgcgcacagccactcgactgtttcgccaaagaaaagaaaccctat
tctttccataaaattcctgaaagtggttctgcttgcacagagtcaaacttctatactgga
gagcttcataatcaaaatgccgatgtagacattaccggaagaaagtatctttgcattaac
aatcaatattatagagagaacggaggagcctttactgttagatctctgaacatcacgaag
aaccttggacctatagtgtttagagaaaatgtctctaatgacaacggtggagctattttc
tcaacaaattgcaacatcacatacaataaacaagactgctgtttcgttaacaacatggcc
aatgtcattatcgatttgctcgcatctcgctctggtggcgccattaaaagtgccaacctt
gtaatttctaataatgtcggacgttgtcaatttttaaacaatacagcttctctatcggga
ggagctattttagctgacaatgacatcaatattactcataactacggcgacataatttta
aggaataacaaatgtttaaaagatcggagcctaggaggagctctacatagtacgaactgc
tctattacctccaatcacgctcccataaactttataagtaatcaatccggtggtggtggt
gctatctatgcaacaagaacgtgcacgatctcttataattccgaaactataacattctta
aataactgtagtttagatcaattatatgactcttcaagtaactggagagctggaggagga
gttatttactgctcttcttgctcgattacgaataatcctaaaggcttgatttttcagaat
aattcggcaaaacgtgatgcaggcgtaatctttgctcaaaatctcactatcaaagataat
ggacccattttatttataaacaactctgcgacatggggaggagctcttcaaaatcatgat
aggggacaattttatctatccgctgactatggagacatcgtatttaaaaggaacttttgt
attaaatcttggggatatactagaaatgcgctccactcgacgcctaacttaaatctacaa
ataggagcacggcaaggctatagtattaaattttatgaccctattgaaaatgaacatcca
ttatcctctgttcttacatttaatccagaaagctatcatctaggaactgtattattttct
ggtgctgatgtatctacaaataatactgatattaataatctccggagcaaaatgagaaac
gtatcaaaaattgctcatggtgtactcgctgttgaagatagagccgtattagctatatat
aaaatcacacaagatgaaggaactctacgcctaggaaatggcgccgtcattactactata
caaaatgcttctagcccacagacaacagctggctgtacgctagcactctctaaactcgct
ttaaatcttccttctattttagctaaaggtgctgaagctcctaaaatctgggtctatccc
acagaaagtggcaataactacaccgaagatcccaacccaaccatcactctttctggaaat
ttatctctattaaacgatgataacgaagatccctacgactctttaaatctctctagaggg
attacacgtgtgcctttcctatatctttgtgataacgccacaaagaaaattaacattgat
gctctaaatatcgaggcaatcaaccaaaacgctcattatggctatcaagggatttggtct
ccctattgggaagaatacacgaccataaccaacccaacttcagtgctaacagcaaatact
tcccatcgcctgctctatgcagattggaccccaacaggttatattcctaatccagagtat
cgtggcgatctcgtcgctaatgccctctggcaagccgcatataacacaatcacaggttta
catagcaccccccccccccgaacttctttaggagtggctggaagagggtcagtagcctat
gttttacagaagactcgcaatgccaaaccagggtttgaactattctctagaggctactct
acgcaagcctcgcgttccacagagacaaatcatcattttgcattaagcttctctcaattc
tacagcgaaatcaaagaggcgaagtcgcaagacaaagtttctgccaatacttactttgca
ggcgcacaaatacacattccttggtttgatgaaaatctcctcacatcagcatctttgggt
tatgcctattctcataaccatgtaaaaacaaaacatcacactacaaacgccttatccgaa
ggagacttccacagccatacgttaggaagtgagcttttctgtaggttccccgaaggtact
gtctcgaatgtacaattccgtcctttcattaaagctttgggtattcatgcgattcaagaa
agcttcacagaaaccggaaaaaacagccgctattttcaagcaaaagatcccttcattaat
gtcactttacctgtaggagtctatggctatacagaacacgaaatgcatctaaagacctgc
tgggaaatgcagcttgcctatacgccgactatctacagaaaaaaacctaagatcatcacg
acaagacttgtaagtaaaggtaggtggatcacatcaggaacacctgtggatcatcatgcc
gtctccatctcggcaaaaaataccacaactttaaataggatgagcctgagcattaactac
cgtggagatttctcaaaatctacactgtgtaactttctaaacatcacgagtgaaatcaat
ttttag
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