Cervus canadensis (wapiti): 122437270
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Entry
122437270 CDS
T07554
Symbol
NGEF
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122437270 (NGEF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122437270 (NGEF)
Membrane trafficking [BR:
ccad04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122437270 (NGEF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
PH
SH3_2
SH3_16
Motif
Other DBs
NCBI-GeneID:
122437270
NCBI-ProteinID:
XP_043317946
LinkDB
All DBs
Position
2:complement(107160100..107280246)
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AA seq
708 aa
AA seq
DB search
MSMETRDSEDSEKLQKKSVSGSWEVDELASVTPEVLSEAGMPHADQETQDKASRTNAIQR
NSIFNRAVRLRSRGKARGTSERKAGHPADPLENENSVNEPPTLNLPQSRKHLWRIPTQTD
PGAKRISESSSTPGNGATPEEFPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQE
YRDKSTLQEIETRRQQDAEIQGSADGCPSSEEAPEEDDGEEEEEPASPPERKALPQICLL
SNPHSRFNLWQDLPEIQSSGVLDILQPEEIRLQEAMFELITSEASYYKSLNLLVSHFMEN
ERLKKILHPSEAHILFSNVLDVMAVSERFLLELERRMEENIVISDVCDIVYHYAADHFSV
YITYVSNQTYQERTYKQLLQEKAAFRELVAQLELDPKCRGLPLSSFLILPFQRITRLKLL
VQNILKRVEERSEREGTALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVP
IISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDS
APRGLLRVEELEDQGQTLANVFILRLLENSDDREATYMLKASSQSEMKRWMTSLAPNRRT
KFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGW
FPSNMTEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggagaccagggactctgaggactcggagaagctgcagaagaaatcagtgagt
ggttcatgggaggttgatgagctggccagtgtgacacctgaggtcctctcagaagcggga
atgccccatgccgaccaggagacgcaagacaaagcatcccgtaccaacgcaatccagaga
aactccatcttcaatcgagccgtgagactccgaagcagaggcaaagccagaggcacttct
gagaggaaggccggccatccagcagatccactggaaaatgagaactctgtcaatgaaccc
ccgaccttgaatttgccgcagagcagaaagcatctctggaggatacccacccagacagac
ccaggagccaagagaataagcgagtcgtcctccaccccaggaaatggggccacgcccgag
gagttcccagccctcgccgacagccccaccacgctcaccgaggccttgcagatgatccac
cctattcccgccgactcctggagaaacctcatcgaacaaatagggctcctgtatcaggaa
taccgagataagtcaactctccaagagattgagaccaggaggcagcaggatgcagaaata
cagggcagtgctgacgggtgcccatccagcgaggaggctccggaggaagatgacggggag
gaggaggaggagccagcaagcccacccgagaggaaggccctgccccagatctgcctgctc
agcaacccccactcgcgattcaacctctggcaggatcttccggagattcagagcagcggg
gtgctggacatcctccagccggaggagatcaggctgcaagaggccatgttcgagctcatc
acttctgaggcctcctactataaaagcctgaacctgctggtgtcccatttcatggagaac
gagaggctgaagaagatcctgcacccatccgaggcccacatcctcttctccaacgtgctg
gacgtcatggccgtcagcgagcggttcctcttggagctggagcgccggatggaggaaaac
atcgttatctcggatgtgtgtgacatcgtgtaccactacgccgctgaccacttctccgtc
tacatcacctacgtcagcaaccagacctaccaggagaggacctacaagcagctgctccag
gagaaggcagccttccgggagctggtcgcgcagctggagttggaccccaagtgcaggggg
ctgcccctctcctccttcctcatcctgcctttccagaggatcacgcgcctcaagctgttg
gtccagaacatcctgaagagggtggaggaaaggtctgagcgcgaaggcaccgccttggac
gcccacaaggaactggagctggtggtgaaagcgtgcaacgagggtgtcaggaagatgagc
cgcacggagcagatgatcagcatccagaagaagatggagttcaagatcaagtcggtgccc
atcatctcgcactcccgctggctgctgaagcagggcgagctgcagcagatgtctggcccc
aagacctcgcggaccctgcggaccaagaaactcttccgggagatttacctctttctcttc
aacgacctgctggtcatctgccggcagattccgggagacaagtaccaggtgtttgactcg
gccccgcggggcctgctgcgagtggaggagctggaggaccagggccagacgctggccaac
gtcttcatcctgcggctgctcgagaactcggacgaccgggaggccacctacatgctgaag
gcgtcctctcagagcgagatgaagcgctggatgacctcgctggcccccaaccgaagaacc
aagtttgtttccttcacatcccggctgctcgactgcccccaggtccagtgcgtgcatccc
tacgtggcccagcagccagatgagctgactctggagctggccgacatcctcaacatcctg
gacaagacagaggacggctggatcttcggcgagcgtctgcatgaccaggagcgaggctgg
ttccccagcaacatgactgaggagatcttgaaccccaagatccggtcccagaacctcaag
gagtgtttccgtgtccacaagatggacgaccctcagcgcagccagaataaggaccgtagg
aagctgggcagccggaatcggcaatga
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