Cervus canadensis (wapiti): 122446468
Help
Entry
122446468 CDS
T07554
Symbol
COL13A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122446468 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122446468 (COL13A1)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122446468 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122446468
NCBI-ProteinID:
XP_043332673
LinkDB
All DBs
Position
8:complement(67344158..67494491)
Genome browser
AA seq
695 aa
AA seq
DB search
MVAERSGKATAAGARGPGELGAPGTVALAVAPAERCARLPSPGXCGLLALALCSLAVSLL
AHFRTVELQARVLRLEAERGEQQMEPAILGRVNQLLDEKWKLHSRRRRETPKTSPGCHCP
PGPPGPAGRPGLPGDKGAIGMPGRMGGKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGRPGPKGEMGPQGQKGEKGQCGEYPHREHLSGSLAALRSNQIIILKGE
QGQAGIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGM
PGMPGKHGAKGAPGTTVAGMKGEPGIPGAKGEKGAAGSPGPLGLLGQKGEKGDAGNSIEG
SRGEPGPPGLPGPPGPKGEAGADGPPGPPGEQGDKGEPGAPGDQGPTGPKGSKGEPGKGE
MVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGEKGEIGLPGPPGLDGEKGPR
GKPGDVGPPGPQGPPGKPGPAGMKGEDGLPGSPGEKGEKGETGQPGPPGEKGEPGEKGDP
GMEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDG
RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG
SRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2087 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgctccggcaaagcgacagccgccggtgcccgcggccctggggagctg
ggcgcgcccgggacagtggcgctggcggtggcgccggcggagcgctgcgctcggctgccg
agccctgggtctgcgggctgctggcgctggctctctgctcgctggcggtcagcctgctcg
cccactttcggacggtcgagctgcaggcccgggtgctgcgcctggaagcggagcgtgggg
agcagcaaatggagccggctattttgggacgagtcaaccaactgctggatgagaaatgga
agctccactcacggaggcgccgggagaccccgaagacgtccccaggatgccactgcccgc
cagggcctcctggtcctgctggaagacccggcctcccgggggacaaaggtgccattggga
tgcctggacgtatgggaggaaagggccaaccaggcgagaagggcgccccaggagatgccg
gcatgtccatcattggtccccgcggcccccctggtcagccaggcacccgaggttttccag
gatttccgggtcccattgggcttgacggaaaaccgggccggccaggaccaaagggggaga
tgggacctcaaggacaaaagggagaaaagggtcagtgtggagagtacccacaccgggagc
acctaagtggctctctagcagctctgcgctccaaccagataattattctgaagggtgaac
agggccaggctggcatccaaggcccgccagggccaccaggccctcccggaccgagtggac
ctctggggcacccaggactgccagggcccatggggccgcccggcttaccggggcctcctg
gaccaaagggagacccagggatccagggctaccacggccggaagggagaacggggcatgc
cagggatgccaggcaaacacggagcaaagggggctcctggaaccactgtggctgggatga
agggtgaacctgggatcccaggagccaagggtgagaagggggctgcagggtcccccgggc
cactcggcctcttggggcagaagggagaaaaaggcgatgctggcaactccattgaaggaa
gcagaggggagcctggacccccagggcttcctggacccccagggccaaagggggaggctg
gagcagatggcccgccaggccccccaggagagcaaggagacaagggggagcctggagcac
ctggagatcagggacctactggccccaagggctccaagggagaacctgggaaaggagaga
tggtggactacaacgggaacatcaacgaggctctccaggagatccggacactggccttga
tggggccccctggtcttcctgggcagatcggcccacccggagctccggggatcccaggcg
agaagggggagattggactgccaggccctcccggactcgacggggaaaagggacctcgag
gcaaaccaggagatgtgggccctcctggtccccaaggccccccaggaaagcctgggcctg
caggaatgaagggagaagatggcctcccggggagcccaggagagaagggggagaaagggg
agacggggcagccaggaccaccgggagagaaaggagaaccaggggagaagggtgacccag
gaatggaggttcctgggccgccagggccagaggggcctcctggacctccggggctccaag
gcgttcctggaccaaagggggaagcaggactagacggagcaaaaggagaaaagggcgtcc
agggagaaaaaggagaccgaggtcctctgggattacccggagcttcaggtttggacggca
ggcctgggccaccgggtactccaggaccaatcggagttccaggcccagcgggaccaaagg
gagagaggggcagcaaaggcgaccctgggatgacaggaccaacgggagcagctgggcttc
ctggtttacacggaccacccggggacaaaggaaaccggggggagagggggaagaaaggct
ctagagggcctaagggggataagggagaccaaggagcgcctggattagatgccccctgtc
cattgggtgaagatggcttgccagtccagggctgctggaacaagtga
DBGET
integrated database retrieval system
