Cyanistes caeruleus (blue tit): 111937869
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Entry
111937869 CDS
T05602
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111937869 (HNF1B)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111937869 (HNF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111937869
NCBI-ProteinID:
XP_023795167
LinkDB
All DBs
Position
19
AA seq
436 aa
AA seq
DB search
MIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQF
NQTVQGCGNMTDKGSQDQLLFLFPEFNQQNQGAAQLDDACSETPSKKMRRNRFKWGPASQ
QILYQAYERQKNPSKEERETLVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANR
RKEEAFRQKLAMDAYSSGQPPHSMNLLLSHGSPHHNQPSASPPSKMPGVRYSQAASGEAA
SSGAIGHHGSGAMVTTSQAVLQQVSPASLDPGHGLLSPEGKMISVSGGGLPPVSTLTNIH
SLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHS
PHQQPLMQQSPGHMPQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSIS
TLTNMSSSKQCPLQAW
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggggtacatgcagcagcacaacatcccgcagcgagaggtggtggatgtcacc
ggcctcaaccagtcccacctctcccagcacctcaacaagggcacccccatgaagacccag
aagagagctgccctgtacacgtggtacgtccgcaagcagcgggagatcctccggcagttc
aaccagacagtccagggttgtggaaatatgacagacaaaggcagtcaggatcagctgctg
tttctctttccagagttcaatcagcagaaccagggggctgcccagctcgacgacgcctgc
tctgaaacccccagcaagaagatgcggcgcaatcggttcaagtgggggccggcctcccag
caaatcttgtaccaagcctacgagcgccagaagaaccccagcaaggaggagcgagagacc
ctggtggaggagtgcaacagggccgagtgtctgcagcgaggagtgtccccctccaaggca
cacgggctgggctccaacctggtcaccgaggtccgtgtgtacaactggtttgccaaccgg
cgcaaggaggaggctttccgccagaaactggccatggacgcctacagctcgggccagccc
ccgcacagcatgaacctgctgctgtcccacggctccccacaccacaaccagcccagcgcc
tccccgcccagcaaaatgccaggggtccgctacagccaggcggcgagtggcgaggcggcg
tcctcgggggccatcggccaccacggcagcggtgccatggtcaccaccagccaggctgtc
ctgcagcaggtctccccggccagcctggacccgggccacggtttgctgtctcccgaaggt
aaaatgatctccgtgtcggggggcgggctgcccccggtgagcaccctgaccaacatccac
agcctgtcccaccacaacccgcagcaatcccagaacctcatcatgacgccgctctcggga
gtcatggccatcgcccagagtctgaacacctctcaggctcagagtgtccccgtcatcaac
agcgtggctggcagcctggcagccctgcagccggtgcagttctcgcagcagctgcacagc
ccgcaccagcagccgctgatgcagcagtcccccggccacatgccgcagcagcccttcatg
gccaccgtcacccagctgcagaactctcacatgtacgcgcacaaacaggagcctccccag
tattcccacacctcccgcttcccctcggccatggtggtgacggacaccagcagcatcagc
acgctcaccaacatgtcctccagcaagcagtgtcccctgcaagcctggtga
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