KEGG   Clavibacter californiensis: FGD68_12815
Entry
FGD68_12815       CDS       T08592                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ccaf  Clavibacter californiensis
Pathway
ccaf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FGD68_12815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccaf03400]
    FGD68_12815
DNA repair and recombination proteins [BR:ccaf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FGD68_12815
SSDB
Motif
Pfam: Ku TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: UKF79660
LinkDB
Position
complement(2655821..2656888)
AA seq 355 aa
MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEERSREIDVVEFVPSDQIDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFGDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDAD
DDEGEGGEVLDLMDALKRSIERSRGGGSGAEKAPSRNAPSRKAPAKGKASAASAKTGSEG
KSAAAKGTAKSASKSSRSTTAKKSGTAKKSSTTKKAAMTKKAATKKEPPTERKSA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtc
tacagcgcgacgcaggaccacgacgtgccgctgcaccaggtgcacgacgcggacggcggg
cggatccggtaccagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcccacatc
gacaaggcgttcgacgacggcgaccgcacggtcgtgatcaccgaggaggacctctcgagc
ctcccggaggagaggagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccagatc
gatcccgtgatgctcgaccgcagctacttcctggagcccgactcgtcgagcccgaagtcg
tacgcgctcctccgccggacgctgcaggagaccgaccgcacggcgatcgtgcacgtcacc
ctccgccagcgcacccggctcgcggcgctccgcgtgcgcggcgacgtgctcatgctgcag
accctcctctgggacgacgaggtgcgcgaggccgacttcccgtcgctcgacgcggcgccg
aaggtctcgccgcgggagctgaagatgtcggcgcagctcgtggaggggttcgcggaggac
ttcgacccgtcgaagttcggcgacgagtaccaggagcagctgaagaccctgatcgacgcg
aagctcgcccagggtgactcgctcgacaccgacgcgacgttcggggagggcgacgcggac
gacgacgagggcgagggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatc
gagcggagccgcggcgggggatccggggcggagaaggcgccgtcgcgcaacgctccttcg
cggaaggcgcccgcgaaggggaaggcgtccgccgcatcggcgaagacgggcagcgagggg
aagagcgccgccgcgaagggcacggcgaagtcggcgtcgaagtcctcgcgctccacgacc
gcgaagaagtcgggcacggcgaagaagtcgagcacgaccaagaaggccgccatgaccaag
aaggccgccacgaagaaggagcctcctaccgagcggaagagcgcgtag

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