Clavibacter californiensis: FGD68_12815
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Entry
FGD68_12815 CDS
T08592
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FGD68_12815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_12815
DNA repair and recombination proteins [BR:
ccaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FGD68_12815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
UKF79660
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All DBs
Position
complement(2655821..2656888)
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AA seq
355 aa
AA seq
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MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEERSREIDVVEFVPSDQIDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFGDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDAD
DDEGEGGEVLDLMDALKRSIERSRGGGSGAEKAPSRNAPSRKAPAKGKASAASAKTGSEG
KSAAAKGTAKSASKSSRSTTAKKSGTAKKSSTTKKAAMTKKAATKKEPPTERKSA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtc
tacagcgcgacgcaggaccacgacgtgccgctgcaccaggtgcacgacgcggacggcggg
cggatccggtaccagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcccacatc
gacaaggcgttcgacgacggcgaccgcacggtcgtgatcaccgaggaggacctctcgagc
ctcccggaggagaggagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccagatc
gatcccgtgatgctcgaccgcagctacttcctggagcccgactcgtcgagcccgaagtcg
tacgcgctcctccgccggacgctgcaggagaccgaccgcacggcgatcgtgcacgtcacc
ctccgccagcgcacccggctcgcggcgctccgcgtgcgcggcgacgtgctcatgctgcag
accctcctctgggacgacgaggtgcgcgaggccgacttcccgtcgctcgacgcggcgccg
aaggtctcgccgcgggagctgaagatgtcggcgcagctcgtggaggggttcgcggaggac
ttcgacccgtcgaagttcggcgacgagtaccaggagcagctgaagaccctgatcgacgcg
aagctcgcccagggtgactcgctcgacaccgacgcgacgttcggggagggcgacgcggac
gacgacgagggcgagggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatc
gagcggagccgcggcgggggatccggggcggagaaggcgccgtcgcgcaacgctccttcg
cggaaggcgcccgcgaaggggaaggcgtccgccgcatcggcgaagacgggcagcgagggg
aagagcgccgccgcgaagggcacggcgaagtcggcgtcgaagtcctcgcgctccacgacc
gcgaagaagtcgggcacggcgaagaagtcgagcacgaccaagaaggccgccatgaccaag
aaggccgccacgaagaaggagcctcctaccgagcggaagagcgcgtag
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