Cajanus cajan (pigeon pea): 109793281
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Entry
109793281 CDS
T04868
Name
(RefSeq) CHD3-type chromatin-remodeling factor PICKLE
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109793281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109793281
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109793281
Chromatin remodeling factors
NuRD complex
109793281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHDII_SANT-like
DUF1087
CHDCT2
Myb_DNA-binding
SLIDE
Motif
Other DBs
NCBI-GeneID:
109793281
NCBI-ProteinID:
XP_020208331
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MDKVEVGATMGDEIVTSDWNPHADLQAMARAHRLGQTNKVMIYRLITRGTIEERMIQMTK
KKMVLEHLVVGRLKAQNINQEELDDIVRYGSKELFADENDEVGKSRQIHYDDDAIDRLLD
RNQVGDEEAALDGEDEDGFLKAFKVANFEYIEEVEPAEEVAQNIAKENQSSETSSKRTNY
WEELLKDRYEEHQVEELNALGKGKRNRNKWLGGGFSGLEDVSSDGEDENYKADVTDDDSN
SSEATTTTTRRSHKKKARADSMEPLPLMEGEGKSLKVLGFNQSQRTAFVQLLMRFGVGDF
DWKDFTSHMKQKTYEEIEEYGKLFLSHIAEEITDSPTFTDGVPKEGLRIQDVLVRIAILL
LIKDKAKFASENPQTPLFSDDILLRYANLKGTKIWKEEHDLVLLHAVLKHGYGRWHDIVD
DKDLNIQKVICQELNIPFTNLLVQGQVGSQVHNGANISNVESSCNPSGKNGRSHIPADGA
NMTNVQSRCNQSKESGASANLPVQGQVGSQVHNGANMSNVESSCNPSCENGRSDIAANGA
NMTSVQSSCNQSKKSGVSGMAAEGAHGSGNAGNQAQLCQKTSILHQFKDMQRRQADFIKR
RVLLLEKGLNAEYQKEYFGDLKENPVANEEFKGKSKATNMPSYTLGDSDSQMIDPLPRLE
AIGSEEIAISACDYNPDRLQLVFLYNEMCKTVDQNAMDVVKMSLARELREVHVVKNFHKL
EIISEDVNRILNQPNQRSAETQVPNSGSSQVQPSTRDV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggaagtgggagcaaccatgggagatgagattgtcactagtgattggaat
cctcatgctgatttacaagctatggccagagctcatcgacttggacaaactaacaaggtg
atgatttataggcttataacaaggggaacaattgaagaaaggatgattcagatgacaaag
aagaaaatggttttagaacacctggttgtagggaggctaaaggctcaaaacattaaccag
gaagagttagatgatattgtaaggtatggctcaaaggagttatttgctgatgagaatgat
gaggtgggcaaatctcgtcaaattcattatgatgatgatgctatagacagattgttggat
cgcaatcaagttggagatgaagaggctgctttggatggggaagatgaagatggatttctg
aaggcctttaaggtggcaaattttgaatacatcgaggaagttgagccagcagaggaggta
gcacaaaatatagcaaaggagaatcaatcctctgagaccagttccaaaagaacaaattac
tgggaagagttgttaaaagacaggtatgaagagcatcaagttgaagagttaaatgccttg
ggcaaagggaagcgaaaccgcaacaaatggctggggggtggttttagtggtttggaagat
gtaagctctgacggtgaagatgagaattacaaagcggatgttactgatgatgattcaaat
tcaagtgaagctactactactactactagaaggtctcacaaaaagaaagctcgcgcagat
agcatggagccacttcctttaatggaaggtgaaggaaaatctctgaaagtacttggtttt
aatcaaagtcaaaggactgcttttgttcaacttttgatgaggtttggggttggtgatttt
gattggaaagactttacctcccacatgaagcagaagacttatgaagaaatagaagagtat
ggaaaactgttcttgtctcatattgcggaagaaataactgattcccctacattcactgat
ggtgttccaaaagaaggacttcgaatacaagatgtacttgtaaggattgcaattcttctc
ttgataaaggacaaagcgaagtttgcatcagaaaatcctcaaactccgcttttttcagat
gatatcttgttacgctatgcaaatttgaagggtacaaagatatggaaggaggagcatgat
ttagtgttgttgcatgcagtgttgaagcatggctatggaaggtggcatgatattgttgat
gataaggatctgaacattcagaaggtcatctgtcaggagttgaatattccatttacaaat
ttactagttcaaggacaagttggttctcaagtgcacaatggtgcaaatatttcaaatgtg
gagtccagctgcaatccatctggtaaaaatggtaggagtcacataccagctgatggtgca
aatatgacaaatgtgcaatcgagatgcaaccaatctaaggagagtggtgcgagtgcaaat
ttaccagttcaaggacaagttggttctcaagtgcacaatggtgcaaatatgtcaaacgtg
gagtccagctgcaacccatcttgtgaaaatggtaggagtgacatagcagctaatggtgca
aatatgacaagtgtgcaatcgagctgcaaccaatctaagaagagtggtgtgagtggcatg
gctgctgaaggtgcacatggttctggcaatgctgggaaccaagcacagctatgtcaaaag
acctccatattgcatcagtttaaagatatgcagagaagacaggctgactttataaaaaga
agggttcttctcttggagaaaggtctcaacgctgagtatcagaaagaatactttggtgat
ttgaaagaaaatccggtggcaaatgaagaatttaaaggtaaatccaaggcgacaaacatg
ccaagttatacattgggagattctgactcacaaatgattgatccactaccccgacttgaa
gcaataggttcagaggaaattgctatttctgcatgtgattacaatccagatcgattgcaa
ttagtttttctctataatgagatgtgcaagactgtggatcagaatgccatggatgtagtt
aaaatgtctttggccagagaactgagagaagttcatgttgttaagaacttccataagttg
gaaattatttctgaagatgtgaaccgaattttaaatcaaccaaatcaacgttcagcagaa
acgcaagtaccgaattctggcagcagtcaggtacagcctagtacaagagatgtataa
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