Castor canadensis (American beaver): 109675047
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Entry
109675047 CDS
T04791
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109675047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109675047
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109675047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109675047
NCBI-ProteinID:
XP_020007469
UniProt:
A0A8B7TIK7
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MTGSQGVKGEPGDPGPPGLMGSPGLKGQQGPAGSTGPRGAPGDVGSAGEHGIPGKQGVKG
EKGDPGGIAGPPGLPGPKGEAGPPGKSLPGEPGLDGMPGVPGPRGPKGERGLPGVHGSPG
DVGPPGVGIPGRMGSQGPAGEPGIQGPRGLPGLPGTPGSPGNDGVPGRDGKPGLPGPPGD
PIALPLLGDIGALFKNFCGNCQANVPGLKSNKGDEGGAGEPGKFDSVVRKGDIGPRGPPG
IPGREGPKGSKGEQGYPGVPGEKGDEGLQGIPGIPGAQGPAGPPGLVGRTGHPGPAGAKG
DKGSEGQPGKPGPPGPPGVLFNEGNGMSSLYKIQGGVSVPTYPGPPGPPGPKGDPGPVGE
PGAMGLPGLEGFPGVKGDRGPAGPPGVAGMAGKPGMPGPPGVPGEPGERGPVGDIGFPGP
EGPSGKPGINGKDGLPGAQGVMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGA
IGPVGPPGNKGSMGSPGHQGPPGSPGIPGAPADAVSLEEIKKYINQEVLRIFEERMAVFL
SQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQ
NT seq
1729 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatcacagggagtaaagggagaacctggagatcctggtccccctggtttaatg
ggaagcccaggactaaagggtcagcaaggacctgcaggttccacggggcccagaggagca
ccaggagatgttggatcagcaggagaacatggtatcccaggaaaacaaggtgttaaagga
gaaaagggagacccaggtgggattgcaggccctcctgggcttcctggtccaaaaggtgag
gcaggtcctccagggaagagtctgccaggggaaccagggttagatggaatgcctggagta
cctggtccacgtgggccaaagggtgaaagaggactgccaggtgtccacggttccccaggt
gatgtgggcccaccaggggtaggaattcctggcagaatgggctcccaaggaccagctgga
gagcctggtattcagggtcctcgaggcctccctgggttgccaggaactccaggctcccca
ggaaatgatggagtcccagggagggatggaaagccaggcctgccaggccccccaggtgac
ccgattgcgcttcctctcttgggagatattggcgccttgttcaagaacttctgtggcaac
tgccaagccaatgtccctgggctaaaaagcaacaaaggggatgaaggaggcgctggtgag
cctggaaagtttgattctgtagtcaggaagggtgatatagggccgcgggggcctccagga
atcccaggcagagagggacccaagggaagcaaaggagagcagggctaccctggagtacct
ggggagaaaggcgacgagggtcttcaaggaattccaggtattccaggtgctcaaggccca
gctgggcctcctggtttagtgggaagaactggacatcctggtcctgctggagcaaaaggt
gacaagggcagcgagggacaacctgggaaacctggaccacccggaccacctggtgtacta
ttcaatgaaggaaatggcatgagcagtttatataaaatccagggaggtgtgagtgtcccc
acttacccaggaccacctggtccccctggtccaaaaggtgatcctggcccagtgggagag
cctggtgcgatggggctgccaggacttgaaggatttccaggtgtaaagggagatcgaggc
ccagcaggtcccccaggagtagccgggatggcgggaaaacctggtatgccaggacctcca
ggtgttccaggggagccgggtgaaagaggacctgttggagatattggtttccctggacca
gaaggaccttcaggaaagccaggaataaacggaaaagatggattaccaggtgctcagggt
gtcatgggtaagcctggagatagaggccccaaaggagaacgtggtgatcagggaatccca
ggagacagaggcccgcaaggtgaacgaggaaaaccaggccttacaggcatgaagggggcc
ataggtcctgtgggtccaccaggaaacaagggctccatgggatcccctggccaccaaggc
cctccaggctccccaggcatccctggtgctccggctgatgctgtttctcttgaagaaatc
aaaaaatacattaatcaagaggttctaaggatttttgaagaaaggatggctgtgtttcta
tcccagctgaagctgccagcagcaatgttggctgcacaagctcatgggaggccaggccca
ccagggaaggatgggttacctgggccaccaggagaccctggacctcaag
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