Castor canadensis (American beaver): 109682049
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Entry
109682049 CDS
T04791
Symbol
Upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109682049 (Upf3b)
03015 mRNA surveillance pathway
109682049 (Upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109682049 (Upf3b)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109682049 (Upf3b)
mRNA cycle factors
P-body specific factors
109682049 (Upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
109682049
NCBI-ProteinID:
XP_020012637
UniProt:
A0A8B7U0J4
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPQGATCSSGGASGEGAKGDDKQDRNRDKREALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYSRAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKRKTKKRDTKVGTIDDDPEYRKFLESYATDEKMTSTPETL
LEEIEAKNRELIAKRTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEK
RKRKDIEKLKKIERVPEREKIKEEPKIKLLKKPEKGDEKELDKREKPKKLDKENLIDERA
SGQSCMLPKRPDTELKDEKPKRLEEESGRDYRERDRDYERDQDRMLRERERLKRQEEERR
RQKERYEKEKAFKRKEEEIKKEKEALRDKGKKNEGAESISSAEKTEKKEEVVKRDRIRNK
DRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIERKQESGISHRKEGGEE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggaccataggcctaaggagaagcgagtgaccctgttaacgccccag
ggggccacttgcagcagcggtggggcttcaggagaaggcgccaaaggggacgataagcag
gatcgcaaccgggataagagagaggctctgagcaaggtggtaattcgaagattacctccc
actttgaccaaggaacagcttcaggaacatctacagcctatgccagagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtattccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggctatgtattcctt
gacaataaaggtcaggaatatcctgcaatagtagaatttgcaccttttcaaaaagctgca
aaaaggaagactaagaaaagagataccaaagttgggactattgatgatgatccagaatat
agaaaatttttggagagttatgccacagatgagaaaatgacatctactccagagacatta
ctagaggaaatagaagccaaaaatagagaattaatagctaaaagaacaaccccacttttg
agcttcctgaaaaacaagcagagaatgagagaagaaaagagggaagaaaggaggcggcga
gaaatagaaagaaaaagacaaagagaagaagagagaagaaagtggaaagaagaagaaaaa
cgaaaacggaaagacatagaaaagctaaagaagatagaaagagttccagaaagggaaaaa
ataaaggaagaaccaaagattaagctgctgaagaaaccagaaaaaggagatgaaaaagaa
ttggacaaaagagaaaagcccaagaaactggacaaagagaatctgattgatgaaagagct
agtgggcaaagctgtatgctgcccaagcgtcctgatactgaactgaaagatgaaaagcca
aagagacttgaagaagagagtggcagagactacagagagagggaccgggattacgaacga
gaccaggatcgcatgctccgagaaagagagaggctgaagcggcaagaagaggaacgccgt
aggcaaaaggagcgctatgagaaggagaaggcttttaaaagaaaggaagaagaaattaaa
aaagagaaagaagcacttcgggataaaggaaagaagaatgaaggtgcagaatcaataagc
agcgcagaaaaaactgaaaagaaagaggaagtggttaagagagaccgcataagaaacaag
gatcgtccagcaatgcaactttaccaaccaggagctcgaagccgaaatcgactctgtccc
cctgatgacagcaccaagtctggagattcagcaatagaaagaaagcaggaaagtggtatt
agccatagaaaagaaggaggagaggagtga
DBGET
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