Clavibacter capsici: AES38_06215
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Entry
AES38_06215 CDS
T05227
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccap03021
]
AES38_06215
Transcription machinery [BR:
ccap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AES38_06215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALD14142
UniProt:
A0AA86GFN8
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Position
1305740..1306396
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AA seq
218 aa
AA seq
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MQSTEDAADQQEAERAEVEESRAAQPGDNRELFEEQALPFIDQLYAAGLRMTRNPADAQD
LVQETFVKAYTAFHQFKQGTNLKAWLYRILTNTFINNYRKKQRDPYNGTIDELEDWQLGG
ATSATATTTRSAEAEAIDHLPDSTVKDALQSIPEDFRMAVYFADVEGFSYQEIADIMKTP
VGTVMSRLHRGRRMLRGLLSDYARERGISTAHLTGATK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtccacggaggacgccgcggaccagcaggaggccgagcgggccgaggtcgaggag
tcgcgcgcggcccagcccggcgacaaccgcgagctcttcgaggagcaggcgctccccttc
atcgaccagctctacgccgcgggcctgcgcatgacgcgcaaccccgccgacgcgcaggac
ctggtgcaggagacgttcgtgaaggcctacacggccttccaccagttcaagcagggcacg
aacctcaaggcctggctgtaccggatcctcacgaacaccttcatcaacaactaccgcaag
aagcagcgggacccgtacaacggcaccatcgacgagctcgaggactggcagctcggcgga
gccacctccgccaccgccaccaccacgcgctccgccgaggcggaggccatcgaccacctg
ccggacagcaccgtcaaggacgcgctgcagtccatcccggaggacttccggatggccgtc
tacttcgcggacgtcgagggcttctcctaccaggagatcgccgacatcatgaagaccccc
gtgggcaccgtcatgagccgcctgcaccgcggccgccggatgctgcggggcctcctttcc
gactacgcgcgcgagcggggcatctccaccgcgcacctcactggagcgaccaaatga
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