Cyprinus carpio (common carp): 109045667
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Entry
109045667 CDS
T05134
Symbol
gemin5
Name
(RefSeq) LOW QUALITY PROTEIN: gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109045667 (gemin5)
03041 Spliceosome [BR:
ccar03041
]
109045667 (gemin5)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109045667 (gemin5)
mRNA cycle factors
P-body specific factors
109045667 (gemin5)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109045667 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
109045667
NCBI-ProteinID:
XP_018919049
LinkDB
All DBs
Position
41:complement(14088209..14111143)
Genome browser
AA seq
1444 aa
AA seq
DB search
MHQRHLPASPNWYCSRCSDINGKGVLGFGAKNTIYLLNVTAASPAVTGELTGHTERVSGF
AFCSHDGQEHICASTSDDKTVKVWDAEQKILLKEHSVHQSTISAVHWSPVQKLLLVTGDE
KGIVVCYWFSTNDTQSFFPEPRTIFCLSCSPHEENYIAVGYKDGMIVVIDISKKGEVIHR
LRGHDDEIHALAWCPQPREEPLCGRLEDNTDGSNGVTQGAEMGCYLASGSRDQTVRIWST
ARGKGVMTLKLPFLKRRGLGVDPTVKERLWLTVHWPKGRPSQIVSSCFGGEIIMWDLKKS
GKQKWNLLGSSSDGQNHSRIVFNMSSFHSGDRELLLSTSMDREIKCWDLASLECCWTLPT
LGGFVYCLSFSSVGTGCLALGVGDSMIRVWNTLSIQNQYDIKTFWQGVKSKVTALAWHPL
KEGSLAFGTDDGKVGIYEVYSNKPPQISSTYHRRTVYSLSWGPPVPPMSFGGSGDKPSYS
LYSCAGEGVIFQHDPWKLSGEASNIDKLIRDTNNIKHKIPPHTDLSWKPDGSVLAIGNED
GSIEVLKAPTLKLLCTVQQHHKIINSLRWHHEHSSQNELQYLLASGSSNAIVYVHDLKSV
IETPSESPVLMTEPFRTLSGHTNKITSLAWSPHHDGRLVTVCYDGTAQVWDVLKEEPVCN
YRGHSGRLLCVQWSTVHPDLVWTGGDDFTLHEWAVSKQEHVTPPKTKKRIEIEKKRGPQK
KSKKKKKAPEKGGMKAEERELPLGEEIKGAAGSGAEEGQSDNVEEEEERENTDGPSVTGW
SRESSVDTRGTERVQNGEKFSHAVKREVKEDKKREKPDLSLKKRKPRSILPLSTSMDHRP
XEELQQDCLTLAAVRYSHGQSGACVPGSGDHIQLGLFTDRDALYRMFQEEEESHVEAGHY
DSMVYLRLWKGDLIGAINLAAEKGELTDHLLSLAPMAGYQVWARTVEVYVKQLCHHEQFL
KAASHLVSIHKLYEAISLLKSHQFYREAIALARARLQPEDPVLKDLYMSWAAVLEKDGHY
ATAAKCYLAADSNFDAAKVIAKKGDVISLRTAANLAQISGENELAHSLSLRCAKDLMLFQ
DWAAAQEVLRMQDSLLGHRLVFCVNEILSQRLADADVVTWSVASSHTWSKSCDENFLSMV
HRVWQSEFEVTAADLVKVKTLSQQLRAIENPPATTSVPLKQLLFHISLDVTLCALSQLLC
DWPSVLEDLLRALTRGSEVGHFTLMTEVCQLLLTQGLESVTFYKQKLDPTDERSLVISES
VEAFVCYQLMYKKWWNYSAETSALTNNTFSNGDCLTEKNHSEVEANRNGEAQSDAIFSEG
FWKVLLSEPHANLQATQRAIEEIQRRVTSLIQQHSQRKDSRESPQALSTPQSETSEEHGG
PLSGKSSESLSALTAQVAEHHKALTAIPELVKKYSFPDVMECCIVLLYMGKHLNPCKAWK
RLTQ
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaacgacatctgccagcgtctccaaactggtactgttcacgttgcagtgacata
aatggaaagggagtgctgggttttggagcaaagaatacaatttatctactaaatgtgact
gcagcatctccagcagtaacaggtgaactcactgggcacactgaaagagtttctggtttt
gcattttgctcccatgatggacaagaacacatttgtgctagcacttcagatgataagaca
gtcaaagtctgggatgctgagcagaaaattctgctgaaagagcacagtgtccaccaaagc
accatctctgcagtccactggtctccggtgcagaaacttcttctagtcaccggagatgaa
aagggcattgtggtgtgctattggtttagcactaatgacacacagagcttcttccctgaa
cctcgaacaatcttctgcttatcctgctctccacatgaggaaaactacattgcagtgggg
tataaggatggaatgatagtagtgatagacatcagtaagaaaggggaggtaatccatcgg
ctgagggggcatgatgatgagattcacgcattggcatggtgcccccaacccagagaagag
cctctatgtgggcgattggaagacaacacagatggaagcaatggggtgacgcaaggagca
gaaatggggtgttacctggcgtcaggtagtcgagatcaaactgtgcgaatatggagcaca
gccagaggaaaaggtgtaatgaccctgaagcttcccttcctgaaaagacgaggactagga
gttgatccaacagtgaaggaaagactctggctgactgtccactggcctaaggggagacct
tcacagattgtgtccagctgtttcggtggtgagatcataatgtgggatctcaagaagtca
ggcaagcagaagtggaatctgctgggcagttcctcagatggtcagaatcacagccgtatc
gtctttaacatgagctcatttcactctggggacagagaacttctgctcagtacctcaatg
gacagagagattaagtgttgggacctggcatctctggaatgctgttggactctgcccact
ctgggtgggtttgtgtactgtctcagcttttcttcagttggcaccggctgcctggctcta
ggcgtcggggacagcatgatccgggtgtggaacaccctgtctattcagaaccaatatgac
atcaagacattctggcaaggggtcaaatctaaagtcacagccttggcatggcatccacta
aaagagggctctctggcgtttggtacagatgacggtaaagtgggcatctatgaggtttac
tctaacaagccacctcaaatctcaagcacttaccaccgcagaaccgtctactccctctca
tggggccctcctgtgccgcccatgtcttttgggggatcaggagacaagccatcctacagc
ttatacagctgtgccggagagggggtcatcttccaacacgacccctggaagctctcaggg
gaggccagtaacattgacaaacttatccgagacaccaacaacatcaaacacaagattccc
ccccatacagacctcagctggaagccggacggcagtgttttggccattggaaatgaagat
gggtccatagaggtattgaaggctcccacgctgaagctcttgtgcacagtgcagcagcat
cataagattattaattcactgcgttggcatcatgaacactcctctcagaatgagctgcag
tatctgctggcgtccggctccagtaatgccatagtctatgtccatgacctaaagagcgtc
attgaaactccatcagagagtccagtgctgatgacggaaccttttagaactctctctggt
cacaccaacaaaatcaccagcctagcatggagcccccatcatgatggccgtctggtgaca
gtgtgttatgatggaactgctcaggtgtgggatgtgctgaaagaggagccggtgtgtaac
tacaggggtcactcaggccgactactgtgcgtgcagtggtccactgttcacccagaccta
gtctggaccggtggagatgacttcaccctccatgaatgggccgtatccaagcaggaacac
gtcacacctccgaagactaagaaacgtattgagatcgagaaaaagagaggaccgcagaaa
aagtccaagaagaaaaagaaggcaccagaaaaaggagggatgaaggcagaagaaagggaa
ttgcctttaggtgaagaaattaaaggagcagcaggcagtggagcagaagagggccaatca
gacaatgtcgaggaggaagaggagagggagaacacagacggtccatccgtcacgggctgg
tccagagagagcagtgtggatacacgtggcactgagagggttcagaatggagaaaagttc
agtcatgcagttaaaagggaagtcaaagaggataagaaaagagagaaaccagatctgtct
ttaaaaaagagaaagccacgctccattctaccgttgagtacttctatggatcaccgacca
naagaggaacttcaacaggactgtctgacactcgcagctgtaagatactcacatgggcaa
agcggcgcatgtgttccaggatctggagatcatattcagcttggcctgttcacagacagg
gatgccctctacaggatgtttcaggaggaagaggagagccacgtggaggctggtcattat
gactcgatggtttatctgaggctgtggaaaggagatctgattggagcaataaatcttgct
gcagagaaaggagaactgactgaccatctcctcagtttagctccaatggctggctatcag
gtgtgggccaggactgtagaggtgtatgtgaagcagctctgccaccacgagcagttcctc
aaagcagcatcacacctcgtctccatccataaactctatgaggccatcagccttctgaag
agccaccagttctaccgggaggccatagctttagcaagagccagactccagccggaggac
cctgtgctgaaagatctctacatgagctgggctgcagtgcttgaaaaggatggccattat
gctactgcagcaaaatgttaccttgccgcagactctaactttgatgcagctaaagtgatt
gccaagaagggggatgtgatatcgctaaggactgcagctaatctggcgcagatatcagga
gaaaatgagcttgcacattctctctctctgaggtgcgccaaagacttgatgctcttccag
gactgggctgcagcacaggaagtcctgaggatgcaagactcccttttgggtcacagactg
gtgttctgtgttaatgagatcctcagtcagaggctggcagatgcagatgtggtcacctgg
agtgtggcttcttcacacacctggtctaagtcatgtgatgagaacttcctctccatggtg
cacagagtgtggcagagtgagtttgaagtgacggcggctgacctggtcaaagtgaaaacg
ctcagtcaacagctgagagccattgagaatcctcctgccaccactagtgttcctctgaaa
caactcttatttcacatctcattggacgtaacactgtgtgctttgagtcagctgttgtgt
gattggccatctgttctagaggatctgctgcgagctctcactcgaggttctgaggtggga
cactttacgctaatgacggaggtgtgccagctgcttctgacacaaggtttggagtctgtg
acattctataaacagaaactagacccaactgatgaaagaagcttggtaatttctgaaagt
gtggaggcgtttgtctgttatcagctcatgtacaagaaatggtggaactacagtgctgaa
acatcagctttgaccaataacaccttcagcaatggtgactgtttaacggagaagaaccac
agtgaagttgaagcaaaccgaaacggtgaagctcaatctgatgcgattttctctgagggc
ttctggaaggttcttctctctgaacctcacgccaatcttcaggccacccagagagccata
gaagagattcagaggagagtcactagcctcattcaacagcacagccagcgtaaagactct
cgtgagagcccacaggcacttagtactcctcaatctgaaacttcagaggaacatggagga
cctttgagtgggaaaagcagtgaatctctctcggctctgactgcccaggttgctgaacac
cacaaagcgctcactgcgattcctgagcttgtcaaaaaatactcatttccagatgtcatg
gaatgttgtatcgtcctgctgtacatgggaaaacatcttaatccctgtaaggcctggaag
agactgacacaataa
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