Cyprinus carpio (common carp): 109053455
Help
Entry
109053455 CDS
T05134
Name
(RefSeq) thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109053455
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109053455
09144 Cellular community - eukaryotes
04510 Focal adhesion
109053455
09142 Cell motility
04820 Cytoskeleton in muscle cells
109053455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109053455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109053455
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109053455
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Opsonins
109053455
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109053455
Exosomal proteins of colorectal cancer cells
109053455
Exosomal proteins of bladder cancer cells
109053455
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109053455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
COMP
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
109053455
NCBI-ProteinID:
XP_018926383
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MEYITVKYSAEILHSRENISICIWNNVAVFINCSFISGYLCFCLSVIDVLSLEDVKQTVA
AVEKISLALKTLSDVYVMSSFRLPPKLGGVLLGLYNKQDNKKYLEVAIMSKINKILVRYV
REDGKLHTVNLQSPNLADGRSQSVILRVGGLRREYLSLELYVNCRLADSAQRLPPLVSLP
RDAELVEIRNGQKAYTRMQGSVEYLKVSLGGTVAQAGALTDCPFQGDASSYNIVNGEVNS
ILGDHTKALIGQLIIFNQILGELREDIREQVKEMSLIRNAILECQMCGFHEPRSRCQPNP
CFKGVACMETFDFPGYRCGPCPEGMIGNGTHCQDIDECAEAQPCYTPGACVNTAKGFTCE
PCPPGLWGPPLSGFGVEYAKSHRQECSDIDECLDLANACTPNSICINTIGSYRCGQCKVG
YVGNQTTGCFPRKSCATLSFNPCDTNAHCIIQRNDDVTCACNVGWAGNGHTCGKDTDIDG
YPDRSLPCINKSGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQ
DSSSFYVVMWKQTEQTYWQSIPFRSMAEPGLQLKAVKSRTGPGEFLRNALWHTGDTDGEV
KLLWKDPRNVGWQDKTSYRWQLIHRPQVGYIRVKLYEGTEMVADSNVVIDTSMRGGRLGV
FCFSQENIIWSNLRYRCNDTVPEDFSTHRKQVLMHIKV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagtacataacagtaaagtattctgcagaaattctccattctcgggagaatatcagc
atatgcatttggaacaacgtggctgtattcattaactgttcctttatttctggctatctc
tgtttctgtctgtcagtgatagacgtgttgagtttggaggatgtgaagcagaccgtggct
gcggtggagaagatctctttagctctgaagactctcagtgatgtgtatgtgatgtcttcc
ttccggctgcctcctaaactgggaggagttctgctgggcctctacaacaagcaggataac
aagaaatacctggaggttgccatcatgagcaagattaacaaaattctggtccggtatgtt
cgtgaagatgggaagctgcacacagtcaatctgcagagcccaaatctggcagacggacgg
tctcagtctgttatactccgtgtcggtggcctgcgcagagagtacctgagcctcgaactc
tatgtgaactgtcgtctggctgactccgcccagcggctgcccccattggtctctctgcca
agagatgcagagctggtggagattcgtaatggccaaaaggcatacactcggatgcagggt
tcagtggagtatcttaaagtgtcactagggggcactgttgcccaggctggggctcttact
gactgcccctttcagggagacgcctcttcatataacatagtgaacggtgaggttaattct
attctaggtgaccacactaaagctctgattgggcagttgatcatctttaaccagatcttg
ggagagctgagagaggacatcagagaacaggtgaaagaaatgtctctcatcaggaatgct
attctggagtgccagatgtgtggatttcatgagccgcgttcacgctgtcagcccaacccc
tgcttcaagggcgtggcctgcatggagacgtttgatttcccagggtaccgctgtggcccc
tgtccggagggcatgatagggaacggcacacactgtcaggatatagatgagtgtgcagag
gctcagccgtgttacacaccaggcgcatgtgtcaacacagcaaaagggtttacctgtgag
ccctgcccacccggactctggggtcctcctctctctggattcggtgtggaatatgctaaa
agtcaccgtcaggaatgctctgatatagatgaatgtcttgatttggccaatgcctgcaca
cccaactccatctgcatcaacaccattggatcatatcgatgcggtcagtgcaaggttgga
tatgttgggaatcagacaactggatgtttccctcggaaatcgtgtgctacgctcagtttc
aacccctgcgacactaacgctcactgtatcattcagcggaacgacgacgttacctgcgct
tgtaatgtgggatgggccggtaatggtcacacctgtggtaaggacacggatattgatggt
tatccggatcgctccttgccctgcattaacaaaagcggtatggagattgttcaaaccatg
aacagtgacccgggcttggcagtgggttacacagcgtttaacggtgtggacttcgaggga
acatttcatgttaacaccgtgactgatgatgactatgccggcttcatctttggctatcag
gattcatctagtttctatgtggtgatgtggaagcagaccgaacagacatactggcagtcg
atacccttcaggtccatggctgaaccaggcctgcagctcaaggcggtgaagtctcgtaca
ggccccggcgagtttcttcgtaatgctctgtggcacacgggggatacggatggagaggtg
aaactgctctggaaagacccacgaaatgtcggctggcaagataaaacctcgtaccggtgg
cagctcatccatcggcctcaggtcggctacatcagggtgaagctgtatgaaggcacagag
atggtggctgactccaatgttgtgattgacaccagtatgagagggggacgcctgggcgtc
ttctgcttctctcaagagaacatcatttggtccaatctgcgctaccgctgtaacgatact
gttccagaggacttcagtacacatcgtaaacaggttctaatgcacataaaggtttga
DBGET
integrated database retrieval system