Cyprinus carpio (common carp): 109101491
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Entry
109101491 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109101491
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109101491
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
PSMbeta
Motif
Other DBs
NCBI-GeneID:
109101491
NCBI-ProteinID:
XP_018970398
UniProt:
A0A8C2FXA9
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All DBs
Position
27:6001466..6003131
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AA seq
297 aa
AA seq
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MYNMMETEIKSPLPQSNTGSAAGGKNNSSNDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPXHDSPQIQQMH
RYEMAGLQYPMIQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSADHSSLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggcgggcggcaaaaacaacagttccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgcggccagcggaggaagatggcacaagagaatcccaaaatg
cacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacccttcattgatgaggccaagcgcttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctcctgaagaaagacaagtattca
ttgcccgggggactcttggcaccaggtgccaacgctgtcaacaacgccgtgtcagtggga
cagcgcatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctaccctcagcatcccnagcatgacagcccccagatccagcagatgcac
cggtacgaaatggcggggcttcagtaccccatgatccagacctacatgaacgccgcgtcc
acgtacagcagcatgtcaccagcatatacgcagcaaacttccagtgcaatgggtttgggc
tccatggcttcagtgtgcaagacggaacccagctctcctcctccggccataacctctcac
tctcagcgtgcttgtttgggagacctgagggatatgataagcatgtacctgccccccgga
ggagacagcgccgaccactccagcctacagagcagtcggttacacagcgttcacccgcac
tatcaaagcgcagggactggcgtgaacggaacgctacccctaacccacatttga
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