Cynara cardunculus var. scolymus (artichoke): 112501675
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Entry
112501675 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112501675
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112501675
04121 Ubiquitin system [BR:
ccav04121
]
112501675
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112501675
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112501675
Membrane trafficking [BR:
ccav04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112501675
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112501675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
112501675
NCBI-ProteinID:
XP_024961138
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All DBs
Position
LG 1:complement(20324280..20332143)
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AA seq
580 aa
AA seq
DB search
MKIHGDVNAQSLFHSFRHGFRSFSHNAHWVTSSGFQISLASSILSVAGLILALRDGRGRR
SFNNLLSWSPSSESKSSPEELWAVPGLQNLGNNCFLNVVLQALASCSCFLNSLQKMVDEF
EASSEDELKGVMPLAVSLNYLLKELCKVQREGKVLSPRDVMLAMALYTPNFNLTSQQDAE
EALAHILSSLRKECSVCFASNHKSLAVATALGSRILTPERRVFYSELERWTQSFLGPFNG
IVGSILTCQSCSFQISMDFQFFNCLYLSPPTYGGSSIIPGCSIDDCLKQFFVAERLENYF
CTHCWHATAIKYSLLKQNESDIGKLRSCSKQDTCDCKNIPSLGSLPWSNNYSRTFKQLHI
ARSPKILCLNLQRASINVYGEFVKLKGHISFPLTLNISPFQNRGVGIQHSDQKLPISRLV
QQNQQANRYSDFFRLQTDAYPRHIYKQGTENSLTETYIAEETRQPSSEGYADGEIQEEQN
KSCSDNSANTTTHQDSKVGETLNVTPSGHHSYNLVSVVEHFGNTRSGHYTVYRRVIKNRG
TSESYYWVGVSDSRVCMVSEEDVLAADGVTLLFYQRVLET
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccacggcgacgtcaatgctcaatcgctgtttcattcattcagacatgggttt
agaagcttttctcataacgcccactgggttacttcatctgggtttcaaatctctttggcc
agtagtatcctgagtgttgctggtttgattttggccttaagagacggcagaggaaggagg
agtttcaacaatttgttatcatggtcgccgtcgtcggagagcaaatcttcgccggaggaa
ttgtgggcagttcctggattgcaaaacctcggaaacaattgtttcttaaatgtagtttta
caggctttggctagttgttcttgtttcttgaattccctccaaaagatggtggacgagttt
gaagcttcatcggaggacgaactaaagggggttatgccacttgcagtgtcgttgaattat
ctattgaaagaactgtgtaaagttcagcgtgaaggcaaagtattaagtccacgagatgtg
atgctcgcaatggctctttatacacctaatttcaatttaactagtcagcaggatgcagaa
gaggcgttagcccacattttgtcttctttaaggaaagaatgctcagtatgttttgcctca
aatcataagtctctagcggttgcaacagccttgggtagtcgtattcttactccggagaga
agggttttttatagtgagctagaaagatggactcagagtttccttggaccatttaacggg
attgttggcagcattttaacttgccaaagctgttcgtttcagatttctatggattttcaa
ttcttcaattgcttgtacctttcaccacctacatacgggggtagttctattatacctgga
tgctcaatagacgattgcctgaagcaattttttgttgctgaaaggcttgaaaactacttt
tgcactcactgttggcatgccaccgccatcaaatattctttgctaaagcaaaatgagtca
gatattggaaaacttcgaagctgtagcaagcaggatacatgcgactgtaaaaatatacca
tctcttggatcattaccttggtcaaataactattctcgtactttcaagcagttacatatt
gcacgtagtccaaagattttatgccttaacttacaacgtgcttcaatcaatgtatatggg
gaattcgtcaagcttaagggtcatatatcttttcccttgactttgaacatatcgccgttt
cagaatagaggagttggaatacagcattctgaccagaagttgccaatcagtagattagta
cagcaaaatcaacaggcaaatcgttattctgacttttttagattacaaaccgatgcatac
ccacgtcatatatacaaacaaggaacggaaaacagtttaacagaaacatatattgctgag
gaaacccgacaaccttcatcagaaggttatgctgacggagaaattcaggaagaacaaaac
aaaagctgttcagacaactctgcgaatactactacacatcaagatagcaaggtgggcgag
accttgaatgtgacgccaagtggacatcattcgtataatcttgtttctgtagtggaacac
tttggaaatacgagaagcggtcattatacagtttacagaagagtaataaagaatcgtgga
acatcggagtcttattactgggttggagtttcggatagccgagtttgtatggtatcggag
gaagatgttcttgctgcagatggggttaccttgcttttctaccaaagagttttggaaact
tga
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