Cynara cardunculus var. scolymus (artichoke): 112519786
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Entry
112519786 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112519786
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112519786
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112519786
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112519786
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112519786
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112519786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
112519786
NCBI-ProteinID:
XP_024983810
LinkDB
All DBs
Position
LG 10:complement(25315431..25337743)
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AA seq
1164 aa
AA seq
DB search
MTMMTQQPLDQEDEDMLVLQTELVEGPIALDGTPPVEGPRPMEVVGQAEVVSTAENQPVD
ETQASRFTWAIENFSRQNSKKLYSDVFMVGGYKWRVLIFPKGNNVEHLSMYLDVADSPIL
PYGWSRYAQFSLAVVNQVHNKFTIRKDTQHQFHGRESDWGFTSFMPLGDLYDPSKGYLVN
DTCVIEADVAVRKVVDYWTYDSKKESGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM
PTTENDMPSGSIPLALQSLFYKLQYNETSVATKELTKSFGWDTYDSFMQHDVQELNRVLC
EKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASF
DKYVEVERLEGDNKYHAEEYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDR
YEFPLELDLDREDGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFK
FDDERVTKEDLKRALEEQYGGEEEVASYFVQCVSASNNLSLYLGKEQHTYHLVVLCLSQQ
LPQTNPGYNNAPFKFTKYSNAYMLVYIRESDKEKIICDVDEKDIAEHLRIRLKKEQEEKE
DKRRYKAQAHLYTIIKVAREVDLLEQIGKDTYFDLVDHDKVHSFRIQKQMPFNIFKEEVA
KEFGIPVQYQRFWMWAKRQNHTYRPNRPLTPQEETQSVGQLREVSNKNHNAELKLFLEIE
IGVDLNPLPPPDKTKDDILLFFKLYDPEKEELRYVGRSFVKSFSKPVEIIPKLNEMAGFN
PDEEIELYEEIKFDPSVMCERLEKNASFRSSQIEDGDIICFQKLHQSLNVEKYRHPDVPS
FLEYVKNRQIVQFRSLDRPKEDDFCLELSKLHTYDDVVERVAQKLDLDDPSKIRLTPHNC
YSQQPKPHPIKYRVADHLLDMLIHYNQISDILYYEVLDIPLPLLQGLKTLKVVFHHATKE
EPVVHNIRLPKQSTVGDVLDELKTKVELSHPNAELRLLEVFYHKIYKIFPLTEKIENIND
QYWTLRAEEIPEEEKNLGPLDRLIHVYHFTKETAQNQMQVQNFGEPFFLVIREDETLEDV
KVRVQRKLQVPDDEFAKWKFAFLSLGRPEYLDDSDIVSSRFQRKDVYGAWEQYLGLEHPD
TSPKRPFTANQNRHTYEKPVKIYN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgactcaacaaccgttggatcaagaagatgaagatatgcttgtgctgcaa
acggagctagtggaaggtcctattgctttagatggtactccacccgtcgaaggccctcgt
cctatggaagtcgtgggacaagcagaagttgttagcactgcggagaatcaaccagttgat
gaaactcaggcatctaggtttacatgggcaattgagaatttctcccgtcagaacagcaaa
aagctttattctgatgttttcatggttggaggatataaatggcgtgtgcttatatttcca
aagggaaacaatgtggagcatttgtccatgtatcttgatgtggctgattcccctatcttg
ccatatggttggagtagatatgcacaattcagtttggctgtggtcaatcaggttcacaat
aagttcacaataagaaaagacacacagcaccaattccatggaagggaaagcgattggggg
ttcacgtcttttatgcctcttggtgatctatatgaccccagtaaaggttatcttgtgaat
gacacatgtgttattgaagctgatgttgctgtacgcaaagtagttgattattggacatat
gactcaaagaaggagtctggctatgttggacttaagaaccaaggagcaacatgctatatg
aactctctacttcaaacattgtaccatattccttactttagaaaggctgtgtatcatatg
ccgacaacagaaaatgacatgccgtcagggagtattcctctggctcttcagagcttattc
tataagcttcaatacaatgaaactagtgttgcgacaaaagagttgacaaaatcttttgga
tgggatacatatgattctttcatgcaacatgatgttcaagaacttaacagggtcttgtgt
gaaaaacttgaagacaaaatgaagggaacagttgtggagggtacaatacaaaagttattt
gaaggacaccatatgaattacattgaatgcatcaacgtggacttcaaatcaactagaaaa
gaatcattttatgatcttcaacttgatgtgaaaggctgtcaagatgtttatgcttctttt
gacaaatacgttgaagtcgaacgactcgagggtgacaataaatatcatgctgaagaatat
ggtttgcaggatgctaggaagggcgttttgtttattgattttcctccagttcttcaactt
cagctaaagcgttttgaatatgatttcatgcgggatacgatggtaaaaataaatgaccgt
tatgaatttcccctagagcttgatcttgatagagaggatgggaagtatctatctcctgat
gcagataagagtgttcgcaacctttacacccttcacagtgttttggttcatagtggtggc
gtgcatggtggacactattatgcctttatcaggccaactctatccgatcaatggttcaag
ttcgatgacgaaagggttacaaaagaagatttgaagagggcattagaagagcaatatggt
ggcgaggaggaggtagcgagttactttgtccaatgtgtatctgcctccaacaacttatct
ttgtatttagggaaagaacagcatacttatcatctcgttgtcttatgcctttctcaacag
ctgccccagacaaatcctggctacaataatgctccgtttaaatttacaaagtactcgaat
gcatacatgcttgtctatatacgtgagagtgacaaggaaaagataatatgtgacgtggac
gagaaagatattgcagaacaccttaggataaggttgaagaaagagcaagaagagaaggaa
gacaagagaagatacaaagcacaggctcatctctacacaattataaaggttgctcgtgaa
gttgacctattagaacagatagggaaagatacctattttgatcttgtggatcatgacaaa
gttcatagttttcgtattcagaaacagatgccattcaacattttcaaggaggaggtggcc
aaagaatttggcatacctgttcaataccagcgcttctggatgtgggcaaagaggcagaac
catacataccgtcccaatcggcctttgacgccacaggaggaaacacaatctgtaggacaa
ttaagagaggtctccaataaaaatcacaacgctgaactgaaattgttcttggagatagag
attggagtggatttgaatcctcttcccccacctgacaaaaccaaagatgatatacttctt
ttcttcaagctttatgatcctgagaaggaagaactccgctatgttggtaggtcttttgtt
aagagtttcagtaagccggttgaaattataccgaagttgaatgaaatggctggattcaat
cctgatgaagaaattgaactttacgaggaaataaaatttgatccatctgtcatgtgtgag
cggctcgagaagaatgcttcatttagatctagccagattgaagatggagacattatttgc
ttccagaaactccatcagtctcttaatgtagagaaataccgacatcctgatgttccttct
tttctggaatatgttaaaaatcgtcagatagttcaatttcgatctctggatagacctaaa
gaggatgatttctgtctggaactgtcaaaattgcatacatatgatgacgtggtggagaga
gtagcccagaagcttgatctggatgatccatccaaaatcaggcttactccacacaactgc
tattctcaacaacccaagccccatcctattaaatatcgagttgcagatcatctgctagac
atgcttattcactacaatcagatttctgatattctgtactatgaagtgttggacatccct
ctgccactgttgcaaggtctaaaaactttgaaggttgtttttcatcatgctacaaaggaa
gagcctgtagttcacaatatcaggttgcctaagcagagtactgttggagatgttctcgat
gaattgaagacaaaggtggaattatcccatccaaatgctgaactgagactgcttgaagta
ttctaccataagatttacaagatttttcctctgaccgagaaaattgagaatataaatgat
caatactggacattacgtgcagaggaaattccagaagaagagaaaaaccttgggcccctt
gatcgcttgattcatgtttaccatttcaccaaagagactgcacagaaccagatgcaagtg
caaaactttggagagcccttctttctggtaattcgtgaagatgaaactttggaagatgtg
aaagttcgtgttcaaaggaagttgcaagttcctgatgatgaatttgctaagtggaagttc
gcatttttatctctcggccggcccgagtatcttgatgactctgacatcgtgtctagccgt
tttcagcggaaagatgtttacggcgcttgggagcagtaccttggattggaacacccagat
accagccctaaaaggccattcacagctaaccagaaccgtcacacatacgagaaaccggtt
aaaatatacaactag
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