Cynara cardunculus var. scolymus (artichoke): 112520859
Help
Entry
112520859 CDS
T05604
Name
(RefSeq) myosin-6-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112520859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112520859
04131 Membrane trafficking [BR:
ccav04131
]
112520859
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112520859
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112520859
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112520859
mRNA cycle factors
P-body specific factors
112520859
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112520859
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112520859
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112520859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
Cnn_1N
AAA_16
Hpr_kinase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
112520859
NCBI-ProteinID:
XP_024985246
LinkDB
All DBs
Position
LG 11:complement(91642..113808)
Genome browser
AA seq
1454 aa
AA seq
DB search
MEAPSKVVVGSQVWLEDPEVAWIDADVLEINDPNIKVKCSNGKELVINASNVYPKDPEFP
KNGVDDMTKLAYLHEPGVLQNLKSRYDNDEIYTYTGNILIAVNPFKRIPQLYEKDIMAKY
KGAALGELSPHPYAIAHAAYRQMVNEEISQSILVSGESGAGKTESTKNLMQYLAFMGGRP
SSEGRRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNERGRISGAAIRTYLL
ERSRVCQVSDPERNYHCFYMLCSAPPEESEKYKVGDPKTFHYLNQSNFFKLNGVDESQEY
LATKKAMDVVGISSDEQDGIFRVVAAILHLGNIEFAKGSEPDSSQPKDDQSRFHLTTAAE
LFMCDKTALEDSFCTRVIVTRGESIKKCLDPTAAAISRDAFAKIVYSKLFDWLVNKINNS
IGQDSDSKFFIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEI
NWSYIKFEDNQDILDLIEKKPGGILALLDEACMFPRSTHETFAEKLYQTFKDHKRFNKPK
LAKTDFTICHYAGDVTYQSEFFLDKNKDYVVAEHQALLNASKCSFVAHLFPPMPEESSKS
SKFSSIGSMFKQQLQALLETLSHTEPHYVRCVKPNNLLKPDIFENQNILQQLRCGGVMEA
IRISTAGFPTRKEFREFVERFKVLAPDAVKKCNDDVSCSKMLLEKAKLEGYQIGKTKVFL
RAGQMAELDAYRTQVLGRSATKVQTKYRSHSTHKKYILLQNSALPLQTICRGQVARNRFE
QRRKEAASLTIQKSARMFLRVKAYRSLCSSAIRIQASIRGLAATNMYLHKRKTEAAIILQ
AQCRQDLVRLPYLRTIKAALITQSVYRGLYAQGELKKRRMAAKDTGVLKDAKSKLEQQVK
ELTCQLEQERQARVDMEEAKNQEIAKLQLFLKEITEYPIKEEGSAQIEIGQLPAPEEIPI
TGNEAIDKLTAENVKLKYMASALQKKFDEAHKLCEERSQQARDAESMVIELKTSMQSLQE
KLCDIETEDLILRQQVMMQPSSASSMMTKDQENGQQEPQSAGQVKRYNSSSRGSMNEKQN
EHVEALLAAVRQELGFSQGQPVATYIIYKSLLHWKCFEAEKTNVFDRVIQMIGSAIEKEH
DNKHLAYWLSTTSTLLFLLHRSLCPAQKSSQTPSLFGRMTQGFKSSSFSDVVRHVEAKYP
ALLFKQQLTAYVEKIYAIIRDNLKKDLAPLLSSCIEAPRTPKDNPPPSSHWESIIECLNG
MLNICKEYHVPAVLVQKIFIEAFSYINVQLFNSLLIHQECCTFRNGEYVKSGLVELEQWC
DQTTREYVGSSLDELQHTSQAVGFLVIPQKSKIGYDELTTKLCPVLSVQQHHRLCTLYSD
DNNSGSVTPEVISNLKVLMKSAADTESKAYLLKDNSSTPFSTEEINHCLHEKDFADVKPS
GELLENPAFQFLLE
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccatccaaagtagtagttggatcacaagtctggttggaggatcctgaggtg
gcttggatagatgccgatgttttggaaatcaatgatccaaatattaaagttaaatgttca
aatggaaaagaactagtaattaatgcatccaatgtgtaccctaaagatcctgagtttcct
aaaaatggagtggatgatatgacaaagctggcttatctgcacgaaccgggggttctacaa
aatttaaaaagtcggtacgataatgatgaaatttatacttacacaggaaatattttaata
gctgtgaacccttttaaaagaatacctcaattgtatgagaaagacataatggcaaaatac
aaaggggcggctcttggggaattgagtccacatccttatgctattgcacatgctgcctac
aggcagatggttaacgaggaaataagtcagtcaattcttgttagtggagaaagtggagct
ggtaaaacagaaagcacaaagaatcttatgcagtatcttgcgtttatgggaggtcggcct
tcatctgaggggcgacggagtgtggagcagcaagttttagaatctaatccggttctagaa
gcgtttggcaatgcaaagacagtcagaaacaataattcaagtcgtttcggtaagttcgtt
gagatccagtttaatgaacgggggagaatctctggagctgctataagaacttatttgctg
gaaagatcacgtgtctgtcaagtttctgaccctgagagaaattatcattgcttttacatg
ttatgctctgcaccacccgaggagtctgaaaagtacaaagttggagatcccaagacgttt
cattaccttaatcaatcaaattttttcaaactgaatggagtggatgagtctcaagagtac
cttgccacaaagaaggctatggatgttgttgggatcagttctgatgagcaggatggtata
ttccgtgttgttgctgcaattctccacttaggtaacattgaatttgccaaggggagtgaa
ccagattcctcacaacctaaggatgatcaatctcgatttcatctaacaactgcagctgag
ctattcatgtgtgataagacggctcttgaagattctttttgcacgcgtgtgattgtaact
cgtggtgaaagcatcaaaaagtgcctcgatccgactgctgcagctatcagtagggatgca
tttgccaaaatagtttattcaaaattatttgactggcttgtcaacaagattaacaattcc
attggtcaagattccgactcaaaattcttcattggggttctggatatttatggatttgag
agtttcaagacaaacagtttcgagcagttttgcattaatctaactaatgagaaactgcaa
caacattttaatcagcatgttttcaagatggagcaagaagaatatactagggaggaaata
aactggagttacataaagtttgaggacaatcaagacattttagatctcattgaaaagaaa
cctgggggaatccttgctcttctggatgaggcttgcatgtttccaagatctacacatgaa
acgtttgcagagaagctttatcaaacgttcaaagatcataaacgttttaacaagccaaag
ctggcaaaaacagatttcaccatttgtcactatgccggtgatgtcacgtatcaaagtgag
tttttcttggataagaacaaggactatgttgttgcagagcatcaagcactcttaaatgct
tcaaaatgctcattcgtagcacacttattcccacccatgccagaggagtcatctaaatcg
tcaaagttctcatcaataggttctatgttcaagcaacaactacaagctttgcttgagact
ctcagtcatacagaaccacattatgttcgttgcgtcaaacccaataatcttttaaagcct
gatatctttgagaatcagaatatactgcaacaacttcggtgtgggggagttatggaggca
attagaatcagtactgctgggtttcctactcgtaaagagtttagggaatttgtagagcgc
ttcaaagtccttgcacctgatgctgtaaaaaaatgcaatgatgacgtcagttgttcaaag
atgctattagagaaggcaaagctagaaggttatcagataggtaaaacaaaagtgtttctc
agagctggtcaaatggccgagcttgatgcttacagaactcaggttttaggaagatctgca
accaaagtccagacaaaatatcgctcgcattctacacacaagaagtatatcttgttacaa
aattcagctttaccactacaaactatttgtagagggcaagtcgcacgtaaccgctttgag
caacgaaggaaagaagcagcgtctttgactatccagaaatccgcacgcatgtttctcagg
gtgaaagcttacaggtcgttatgcagttcagctattagaatccaggcttcaattcgtggg
ttggctgcaaccaatatgtatcttcacaaacggaaaaccgaagcagcaatcattttacag
gctcaatgccggcaagatttggtccgccttccttatttgaggacaatcaaagccgcacta
ataactcagtctgtttatagaggactatatgcacagggagaactaaagaagcgtagaatg
gctgcaaaggatactggtgttcttaaagatgccaaatctaaactggaacaacaagtcaaa
gaactgacctgccaattggagcaggagagacaagcgagggttgatatggaggaggctaag
aatcaggaaattgcaaagttacagttattcttgaaagagataacagagtatcccataaag
gaagaggggtctgcacagatagaaattgggcaacttccggcacctgaagagattcctatt
actggcaatgaggcgattgataagcttactgctgaaaatgtgaaactcaagtacatggct
agtgcactgcaaaagaaatttgacgaggcccacaaactgtgtgaagagaggtcgcagcag
gctagggatgcagagtcgatggtgatcgagttgaagacctccatgcaaagccttcaagaa
aaactttgcgacatagagactgaggatctcattctgcgtcagcaagtgatgatgcaacca
tctagtgcatcttctatgatgaccaaggaccaagagaatggtcaacaagaaccacagagt
gccggacaagtgaagagatacaatagcagctcgaggggttctatgaatgaaaagcagaat
gagcatgttgaagctcttcttgcagctgttagacaagagcttggtttcagtcaaggacaa
ccagttgctacatatatcatatacaaaagccttttacactggaaatgttttgaagctgaa
aaaacaaatgtgtttgatcgtgttattcagatgatcggttcagcaatagagaaagagcat
gacaacaaacatttggcttattggctctcgaccacatctacattgctatttttgctgcac
aggagtttatgccctgctcagaaatcatcacagacaccgtcattatttggaaggatgact
caaggatttaaatcatcgtctttcagcgatgtagtgcgccatgtagaggccaagtaccca
gctttgctttttaagcaacaattaactgcttatgttgaaaaaatctatgcaattattcgt
gacaatttgaagaaggatttggcgccacttctctcctcttgtattgaggcaccacgaacg
ccaaaagacaaccctcctccatctagtcactgggaaagtatcattgaatgcctaaatggc
atgctcaatatatgtaaagaataccatgtgccagcagttcttgttcagaagatcttcatt
gaagctttctcttacatcaatgtgcagcttttcaacagccttcttatacatcaagagtgc
tgcacattcagaaatggggaatatgtgaaatctgggttagttgagttggagcagtggtgt
gatcagaccacaagagagtatgtaggctcatcattggatgaacttcaacacacgagccaa
gcagttggatttctggttataccacagaagtctaagattggctacgatgaactcacaact
aagctatgccctgttctaagcgttcaacaacatcatagactttgcacgctctactcagac
gataacaatagtggaagtgtaaccccagaagttatatccaacttgaaagtcttaatgaag
tctgctgctgatactgaaagtaaagcttatttgctgaaagacaattctagcactcctttc
tcaaccgaagaaattaaccactgccttcatgagaaggattttgcagatgtaaaacctagt
ggtgaactccttgaaaatccagctttccaatttttactggagtag
DBGET
integrated database retrieval system
