Cynara cardunculus var. scolymus (artichoke): 112522046
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Entry
112522046 CDS
T05604
Name
(RefSeq) putative deoxyribonuclease TATDN1 isoform X1
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112522046
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TatD_DNase
Motif
Other DBs
NCBI-GeneID:
112522046
NCBI-ProteinID:
XP_024986876
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Position
LG 11:5068476..5074921
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AA seq
355 aa
AA seq
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MATLRMIDIAVNFTDSMFKGVYNGKQCHLPDIAAVLSRAWGAGVDRIIVTGGSLEESREA
LAIAETDARLFCTVGVHPTRCNEFDESGDPEKHFQALLSLAKEGVEKGKVVAVGECGLDY
DRTHFCSPEIQRKYFERQFELAHLLKLPMFLHMRAAAGDFCDILEQNKQRFYGGVAHSFT
GTPEDRDKLLAFSNLFIGINGCSLKTSENLDALKGIPVDRMMIETDSPYCEIKNTHAGKN
FIKSSWASKKKEKYDQDCLVKGRNEPCLVRQVLEVVGGCKGVADLNQLSRTLYYNTCSHS
SCVCTPLRLQLFEQIFSLCKIAHLVTTIYLCWVNISWNDHFVLQLLRVFQIANNA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttcgaatgatagacattgccgttaacttcacagatagtatgttcaagggt
gtatataatggaaaacaatgccatttacctgacattgcagcagttttaagtagggcttgg
ggcgctggcgttgatcgaattattgtcacgggaggatcacttgaggagtcgagggaagct
ttagctattgctgaaactgatgcaagactattctgtacagttggagtgcacccaacacga
tgtaatgagttcgatgagagtggagatcccgaaaagcattttcaggcactgttgtcactg
gctaaagagggagttgagaaagggaaggtagtggcagttggtgagtgtggattggattat
gacagaactcacttttgttcaccggagattcaaaggaagtactttgagaggcagtttgaa
ttagcacatctcctgaagcttccaatgtttcttcatatgcgagcagctgctggggatttc
tgtgacattctggagcaaaacaagcagaggttctatggcggagttgcccactcatttacc
ggtactccagaagaccgtgacaagcttcttgcattcagcaatctctttataggtataaat
ggttgctctttgaaaacttctgaaaaccttgatgctctaaagggtatcccagttgataga
atgatgattgagaccgattctccttattgtgagataaaaaacactcatgctggaaaaaat
ttcataaaatcctcctgggcatctaaaaagaaagagaagtatgaccaggattgcctagtc
aaaggtcgaaatgaaccttgtttagttcggcaagtcctcgaggtcgttggtggttgtaaa
ggtgttgctgatcttaaccaactgagcagaaccctgtactacaatacgtgcagccattcg
agttgtgtatgtacaccgttgaggctgcaactctttgaacagatctttagcctttgtaaa
atcgcccaccttgtaacaaccatttacttgtgttgggtgaacattagctggaatgaccat
ttcgttcttcagctgcttcgggttttccaaattgccaacaatgcataa
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