KEGG   Cynara cardunculus var. scolymus (artichoke): 112524134
Entry
112524134         CDS       T05604                                 
Name
(RefSeq) lysine-specific demethylase JMJ25-like isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112524134
Enzymes [BR:ccav01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     112524134
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112524134
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2
Other DBs
NCBI-GeneID: 112524134
NCBI-ProteinID: XP_024989570
LinkDB
Position
LG 13:16911881..16922025
AA seq 1453 aa
MEMEEVAAIEQDGSRMVTSAGFGDEAIDIAREGNQVDLNVAVMMDSGDENGTVEGYEPKD
FEAKMEKTLVDDEIGGFVSEENGENGVSIDEKDGVIVKKKRPCRPGPQDRVIVLGIHCVN
VDFDAINRKHSGRGRGRGSGRGRGRGRPRGPNYNKRKFSGNEAYEQIGLGETTQVGLGET
TQISAGETTQIEAYEQIGSGETTVDGHERAEIPIIDYDFGEENQNYADGASNASEGGGNS
MCSELSSKKKRRKLIGGANGVGANGVGIKVRGRGRPMGSKDSKKRNRRCRRFIYPDENTI
GKEGQSGENPIYRMSWKESGHGEEDQNHAGEASNGFEGQNKAPSRSKLKVMKRKWVVGGM
NGTIRRGRPKKYVDGYKERGAYIDGIADELVVAGIDGKNAPLIVGNELQLLAAGKEDQSG
ASETIIDDYGTGEIVAGGDQSCYLEYQNHAREAANRNRDRKNILSCRVRRKPRLIVAGEI
MTYSDVKRRRRSVKAGDATIPRRPRGRPRKYIHGPQRIGGVAGVSSDTKIHGDSNAGVSN
GHQGSLMCHQCTKRYKNVVSCSNCKRKRYCYGCIVSWYPERTKEEVKVACPYCRGNCNCK
ACLQANVIVKASHKEADEDIRLQRSLYLLKKTLPLLRHIKEEQRCELMVEAGILGVQLTE
EHVRKASFDDDDRVYCDNCNTSIVNFHRSCPSPDCSYDICLNCCRELREGIQPGGSEAES
SFQQFLENSQLQGADARGQFFGWKADFKADAFIADSSLDFPVWKANLDGSIPCPPKARGG
CGIGMLELRRIFEVNWVQELVEKAEVLTFNFQMADIDFGEACPVCPSIDTVENHDVVRKS
ATRKNSHDNFLYCPNAIDLEDNEFEHFQMHWRRGEPVVVRNVQAKTCGLSWEPMVMMRAF
RTAKKRLKEENQCVKAIDCLDLCEVEIHLKQFFGGYVVGRRHLNGWPEMLKLKDWPPTNS
FDECLPRHCAEFIAMLPFSDYTHPRSGLLNLATKLPDGSRRPDLGPKSYIAYGFPEELGR
GDSVTKLHCDISDAVNILMHTTKVKVSSAELKNINKLQKEHKAEDMSVISSMAHKALSSF
TTEPPKDSCNVDSVDSLCIQKGGDDDETGALMAEEQSINKNLNGSLVKTAALLNPLALET
TESDRNELDFNLSCPEGNRPSDLALVVGKADPDEDIQRSDDQCSESVYGGALWDIFRRQD
VPKLTEYLNKHQKEFRGINNAPVRSVVHPIHDQTFYFDEKHKKQLKEEFGVEPWTFEQYL
GEAVFIPAGCPHQVRNRQSCIKVALDFVSPDNVEECIRLTEEFRLLPKTHRSKEDKLEVK
KMGLYAASVVIDEASKLMLKHNSQLQPQPPIDAANLNLEQGVEAREPQPPIDPANENLEQ
SVEQMEPQPPLEAADENVEQGELREPQPPLDAANENVEQGVEPREPQPPIDSANENMEQG
VEPTEAVVLRDLS
NT seq 4362 nt   +upstreamnt  +downstreamnt
atggaaatggaagaggttgctgctattgaacaagatggttcaagaatggttacctctgct
ggctttggagatgaagctattgacattgctagggaaggaaatcaggtcgatttgaatgtt
gctgtgatgatggacagtggtgatgaaaatggaactgttgaagggtacgagcctaaggat
tttgaggctaagatggagaaaacccttgtagatgatgagattggaggatttgtaagtgaa
gaaaatggcgaaaatggtgttagcattgacgagaaagatggggttattgttaagaagaag
cgcccttgtcgaccagggcctcaggacagggtgatagttcttggtattcattgcgttaat
gttgattttgatgctattaacaggaagcatagtggtcgtggccgtggccgtggttctggt
cgtggccgtggtcgtggtcgacccaggggtccaaattacaataagaggaagttctctggc
aatgaagcttacgaacaaattggtcttggtgaaactacacaagttggtcttggtgaaact
acacaaattagtgctggtgaaaccacacaaattgaagcttacgaacaaattggttctggt
gaaactactgttgatggacatgagagagctgagattccaattattgactatgactttggt
gaagaaaatcagaattatgcagatggagcttctaatgcaagtgagggaggtgggaatagt
atgtgttctgaactcagttcaaagaagaagagaaggaagcttattggtggtgctaatggt
gtcggtgctaatggtgtcggtattaaagttagaggtcgaggtcgtccaatgggttcaaag
gactccaagaagaggaatcgcagatgtcgtcgattcatttatccggatgagaataccatc
ggtaaagagggtcaaagtggtgagaatccaatttatagaatgagttggaaggaatcaggg
catggtgaagaagatcaaaatcatgcgggtgaagcttccaatggatttgaaggtcagaat
aaggcaccatccaggagtaagttaaaagtgatgaagcgaaagtgggtggtcggtggaatg
aatggcacaatacgtagaggcaggccaaagaagtatgttgatgggtacaaggagagagga
gcatatattgatggaatagctgatgaacttgtagttgcaggaattgatggaaagaatgct
cctctgattgtgggaaatgagttgcaactacttgcagctggcaaagaggatcaaagtgga
gctagcgaaaccatcattgatgattatggtacgggtgagattgtggcaggcggtgatcaa
tcttgttatttggaatatcagaatcatgcaagagaagctgccaacagaaacagagaccgt
aagaatattttatcttgtagggttaggaggaaaccacggttaattgtagctggtgaaatc
atgacctattctgatgtgaaaaggcgtaggcgctctgtcaaggcaggggatgccaccatt
ccaagaaggcccagaggtaggcctaggaagtatatacatggtcctcaaagaattggaggg
gtggctggagtatccagcgacacaaaaatacatggcgactcgaatgcaggtgtttcaaat
ggacatcaggggagtttgatgtgtcaccagtgcacgaagcgttataaaaatgttgtctct
tgttcaaattgcaaaaggaagcgctattgctatggatgcatcgtgagttggtatcctgag
agaacaaaagaagaagtcaaggttgcatgtccatattgtcgtggcaattgcaactgcaaa
gcttgtcttcaagcaaatgtaatcgtaaaggctagtcacaaagaagccgacgaggatatc
agattgcaaaggtcactttatttgcttaaaaaaacgctacctcttttgaggcatataaaa
gaggagcagagatgtgagctcatggtggaagctggaatactgggtgttcaattgacagaa
gaacatgtacggaaagcttcatttgatgatgatgatagagtgtactgtgacaactgcaat
acatcaattgtcaatttccacagaagctgcccaagtcctgattgctcttatgatatctgt
ctcaattgctgtcgcgaactcagagaaggtatccagcctggtggtagtgaagctgaatct
tcttttcaacaatttcttgagaactctcaacttcagggtgcagatgcaaggggacaattt
tttggatggaaagctgactttaaagcagacgcttttatagctgatagctccttagacttc
cctgtttggaaagcaaacttggatggaagtatcccctgccctccaaaagctcgtggaggt
tgtggtattggaatgctagaattgagacgaatatttgaagttaattgggtgcaggaactt
gtcgaaaaggcagaggtcctgaccttcaattttcagatggccgatatcgactttggagaa
gcatgtccagtctgtcctagcattgacactgtagaaaatcatgatgttgttaggaaatcg
gctactaggaagaatagccatgacaattttctctactgcccaaatgctattgatctagaa
gacaatgagtttgaacatttccaaatgcattggaggagaggtgaaccggttgtggttaga
aatgttcaagcaaagacatgtgggcttagttgggaaccaatggtcatgatgcgagctttc
aggactgctaaaaaaaggttaaaggaggagaatcaatgtgtcaaggctattgattgcttg
gacttgtgtgaggtggagattcatcttaagcaattctttgggggatatgtagtgggacgt
agacatctaaatggatggccagagatgttaaagctcaaggattggccgccaacaaattca
tttgacgaatgcttgccaaggcattgcgcggagttcattgcaatgcttccttttagtgat
tatactcatcctagatcaggtcttctcaatcttgctacaaaacttcctgatggttctcga
aggccagacttgggtcctaaatcttatattgcttatggatttcctgaggagcttggtaga
ggtgattccgtgacaaaactacattgtgatatttctgatgcggtaaatatactgatgcac
acaaccaaagtgaaagtttcttctgcggaactcaaaaacattaacaagttgcagaaagaa
cacaaagctgaagacatgagcgtcatctctagtatggcacataaggcattgagctctttc
acaacagaaccacctaaagattcttgcaatgttgattctgtggattctttatgcatacaa
aaaggaggtgatgatgatgagactggggctttaatggctgaagaacaaagcatcaacaag
aatttgaatggcagccttgttaagacggctgctttgttgaatccattggctttggaaaca
actgagtcggacagaaatgaattggatttcaacctttcatgccctgaaggcaacagaccc
tcggacttggccttggtggtaggaaaagcagacccagatgaagatattcagcgaagtgat
gatcaatgttctgaaagtgtatatggtggtgctctatgggatatcttccgtaggcaggat
gtgcctaaattgactgagtacctgaataaacatcagaaagaatttcgtggcatcaacaac
gctcctgtgagatctgttgttcatccaatccatgaccaaaccttctattttgacgaaaag
cacaagaaacagctgaaggaggagtttggcgtggagccatggacatttgagcaatatctt
ggagaggctgttttcattcctgcaggttgcccacatcaagttagaaatagacagtcatgc
attaaagtggctcttgactttgtgtcaccggataatgttgaagagtgcatccgcttaaca
gaagagtttcgcttacttccaaaaacccatagatccaaggaagataaattggaggtgaag
aagatggggttatatgctgcaagtgttgttattgatgaagcgagtaaattgatgctgaag
cacaattctcaactgcaacctcagcctccaatagatgctgcaaatctgaacttggagcaa
ggtgttgaagcaagggaacctcagcctccaatagaccctgcaaatgaaaatttggagcaa
agtgttgaacaaatggaaccccagcctccattagaggcagcagatgaaaatgtggaacaa
ggtgaactaagagaacctcagcctccactagatgcagcaaatgaaaacgtggaacaaggt
gttgaaccaagggaacctcaacctccaatagactctgcaaatgaaaacatggagcaaggt
gttgaaccaacagaagctgttgtgttgagagacttgagttag

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