KEGG   Cynara cardunculus var. scolymus (artichoke): 112524437
Entry
112524437         CDS       T05604                                 
Name
(RefSeq) rac-like GTP-binding protein RAC1 isoform X1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112524437
   04148 Efferocytosis
    112524437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112524437
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112524437
   04031 GTP-binding proteins [BR:ccav04031]
    112524437
Membrane trafficking [BR:ccav04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    112524437
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    112524437
  Macropinocytosis
   Ras GTPases
    112524437
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    112524437
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112524437
  Exosomal proteins of other body fluids (saliva and urine)
   112524437
  Exosomal proteins of colorectal cancer cells
   112524437
  Exosomal proteins of bladder cancer cells
   112524437
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    112524437
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU AAA_7
Other DBs
NCBI-GeneID: 112524437
NCBI-ProteinID: XP_024990013
LinkDB
Position
LG 13:40625768..40632899
AA seq 198 aa
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL
DLRDDKQFLNDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP
PKQKKKKKRKGQRACSIL
NT seq 597 nt   +upstreamnt  +downstreamnt
atgagcgcatctcggtttatcaagtgtgtgacggtcggcgatggtgctgttgggaagacg
tgtatgcttatttcttacaccagcaacactttccccactgattacgtgccaacggttttc
gacaattttagcgcaaatgtggtggtagatgggagtactgttaatcttggcttgtgggat
actgcaggccaagaagactacaatagattgagacctttgagctatcgtggtgctgatgtc
ttcatacttgcattttctctcattagcaaggctagctatgagaacgtctccaaaaagtgg
attcctgaattgaggcactatgcacccggcgttccaattatccttgttggaacaaagctc
gatcttcgggatgataaacaattcttgaacgaccatcctggtgcagttccaattacaacg
gctcagggagaggagctgaagaagctaattggtgccccggcttacatagagtgtagttca
aaaacacagcagaatgtgaaggccgtttttgatgcagccattaaagtggttctgcagcca
ccgaagcaaaagaagaaaaagaagcgaaagggtcaaagggcgtgctcgatactgtga

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