KEGG   Cynara cardunculus var. scolymus (artichoke): 112525830
Entry
112525830         CDS       T05604                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030  DNA replication
ccav03410  Base excision repair
ccav03420  Nucleotide excision repair
ccav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112525830
   03410 Base excision repair
    112525830
   03420 Nucleotide excision repair
    112525830
   03430 Mismatch repair
    112525830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccav03032]
    112525830
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112525830
DNA replication proteins [BR:ccav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    112525830
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     112525830
   MMR (mismatch excision repair)
    Other MMR factors
     112525830
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    112525830
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Porin_OmpL1
Other DBs
NCBI-GeneID: 112525830
NCBI-ProteinID: XP_024991880
LinkDB
Position
LG 13:complement(12331856..12333800)
AA seq 372 aa
MLELRLVQGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY
RCDRNLSMGMNLGNMAKMLKCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD
IDSEHLGIPETEYEAIVRMPSSEFARICKDLSTIGDTVLISVTKEGVRFSTKGDIGTANI
VCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLATQVTVSLSSELPVVVEYK
IGEMGYLRFYLAPKIEEDEEMGRHQAEPVAVETKKKPEKTPKTEPKTNGEPKRRVMKIDL
DEEEEETKPKIVSETNGYVEVVGSKPGTGIIKPKEEVNGEVEVMDVKPSIEAAAAKAEKE
TNGGEADVMDVE
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgctggaactcaggttggtgcaggggagcttgttgaagaaagtgatggaatccataaaa
gatctggtgaacgacgccaactttgactgctcggccaccggattctcattgcaggccatg
gattcaagccatgtagcgctggtctcactcctcctcagatccgagggttttgagcactac
cgatgcgatcgtaacctctcaatgggaatgaatctcggtaacatggccaagatgctcaag
tgcgccggcaatgacgatattgtcaccatcaaggccgacgatgggggcgactgtgtcact
ttcatgtttgaaagccccaatcaagataagattgctgattttgagatgaaactgatggac
atcgatagtgagcatcttgggataccagaaacagaatatgaagccattgttcgaatgcca
tcatctgagtttgcaagaatctgcaaagatcttagcaccataggagacactgttctgata
tctgttacgaaggaaggtgtaaggttttcaaccaagggtgacattgggactgcaaatatt
gtgtgcagacaaaacacatctgttgacaagccagaagaagctactataattgaaatggag
acaccggtttcattgacatttgcactgaggtatatgaattcttttacaaaggcaacccca
ctggcgacccaagtgacagtaagtttgtcttctgaactgcctgttgtggttgaatacaaa
atcggagaaatgggttatctgaggttctatttagctccaaagatagaagaagatgaggag
atgggtcgtcatcaggcagaaccagtggcagtggaaaccaagaaaaaacccgagaaaacg
ccaaaaactgaacccaaaaccaatggtgaaccaaaacgtcgtgtcatgaagatagacctt
gacgaggaagaagaggaaacaaaaccaaagatcgtaagtgaaaccaatgggtatgttgaa
gttgtgggttctaagcctggcaccggcattatcaagcctaaggaagaagtgaacggtgaa
gtggaggtcatggatgtcaagcctagcattgaagctgctgcagcaaaggccgagaaagaa
acgaatggtggtgaagctgacgtaatggatgtcgagtag

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