Cynara cardunculus var. scolymus (artichoke): 112528398
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Entry
112528398 CDS
T05604
Name
(RefSeq) protein NLRC3 isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
Pattern recognition receptors [BR:
ccav04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112528398
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
112528398
NCBI-ProteinID:
XP_024995183
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Position
LG 15:8985503..8991666
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AA seq
603 aa
AA seq
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MDFASTLSMYFHPKATTTTSFTADGCMLLRSRMFFSTKLHYVHSGRRRLQFETFAIKNAS
GSSGRSARGRRVYRESQSEAGPLTAVPVKEIASFVLPVGSFVVVTFVMWKLVEKLIMPKR
SKAPAAEKKTTDGVKWSFAAGTNLLPNFGAKIERESKLRLNDFAQELRSFNIVDMSGRNF
GDEGLFFLAESLAYNQVVEEVNFAANGITAEGIKAFDGILQSNIYLKTLNLSGNTIGDEG
AKALCNILVDNNGIQKLQLNSTGLGDEGAKAIAEMLKKNSTLRTLELNNNLIDYSGFSGL
AEALLENKSLQSLYLNGNYGGALGASSLAKGLEGNKALRELFLHGNSIGDEGVRALIAGL
SIHKGKLTALDIGNNMITSKGAFHVAEYVKRSKTLLWLNVYMNDIKDEGAEKIADALKEN
RSITNIDLGGNDIHAKGITAISEVLKDNTVITALELGYNPMGSDGAKALSDVLKFHGNIK
TLMLGWCKIGAKGAEFIADTLKYNNTISTLDLRANGLSDEGAKCLARSLKVVNEALVSLD
LGFNEIRDEGAFAISQALKANEDVRLTSLNLSSNFLTKLGQSALTDARDHVYEMNEKELS
IGF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggattttgcttcgactctctccatgtactttcatccgaaagcaactacaaccaccagc
ttcacagccgatggctgtatgcttcttcgcagtcggatgtttttttctactaagttgcat
tatgtgcattcaggacgccgacgtttgcaattcgaaacgtttgcaataaaaaatgcttcg
ggttcgtctggacggtcggcgagaggtaggagagtttatagggagtctcaatccgaagca
gggcctttaaccgctgttccggtgaaggagattgcttcatttgtgttgccggtcggctcg
ttcgttgtcgttacttttgttatgtggaaattggtggagaagctgattatgcccaagcgg
tcaaaagctccagcagcagagaaaaaaactaccgacggagtgaaatggtcctttgccgct
ggaacgaatttgttacctaattttggtgcaaagattgaaagggaatccaaacttcgacta
aatgattttgctcaagaacttaggtcgttcaacattgttgacatgtcaggtcgcaacttc
ggagatgaaggactatttttccttgcagagagcttagcttataaccaggttgtagaagaa
gtgaattttgctgccaatggaataacggcagaaggaattaaagcttttgatggtattctg
caatcgaacatttatctaaagactcttaacctatcaggaaacactattggggatgaagga
gctaaggctttatgtaatatcctggtggataataatggtattcagaagctccagctaaac
agtactgggctaggagacgagggagcaaaggctattgctgagatgctaaagaaaaactca
accttgcgaacacttgaactcaacaacaatttgattgactattctggattttcaggtctt
gctgaggcacttcttgagaataaatcgttacagagcttgtatctaaatggaaattatggc
ggtgctttaggggcttcttcacttgctaaagggctcgagggtaacaaagctttaagggaa
ctttttttgcatgggaactccataggagatgaaggagtccgtgcattaatagctggattg
tcgatacataaagggaaactcacagctcttgacattggcaacaatatgataacctcaaaa
ggcgcatttcatgttgcggaatatgtcaaaagaagtaaaaccttgttgtggcttaacgta
tacatgaatgacattaaagatgagggagctgagaaaatagctgatgctttgaaggagaac
cgttcaataacaaacatagacttggggggaaatgacatccatgctaaagggataactgca
atatcggaagttctaaaagataataccgtgataacagctcttgaactcggttataatccc
atgggatcagatggtgcaaaagctttgtcagatgttcttaagtttcatggaaatataaaa
actctcatgcttggttggtgtaagataggagcaaagggtgcagagttcatagctgatact
ctaaaatacaacaatacgatctccactttagatctacgagctaacgggcttagtgatgag
ggtgctaagtgcttggctcgcagccttaaggtggtgaatgaagctcttgtgtcacttgat
ttaggattcaatgaaattagagatgaaggggctttcgccatttctcaagcattgaaggct
aacgaagatgtgagactgacatctttgaatctttctagcaacttccttacaaagttaggg
cagagtgctctaactgatgcaagagaccacgtgtacgagatgaatgaaaaagaactaagt
atcggtttctag
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