Caretta caretta (Loggerhead turtle): 125640643 Help Entry 125640643         CDS       T09292                                  Symbol CDH23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism ccay  Caretta caretta (Loggerhead turtle) Brite KEGG Orthology (KO) [BR:ccay00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccay03037]     125640643 (CDH23)    04515 Cell adhesion molecules [BR:ccay04515]     125640643 (CDH23) Cilium and associated proteins [BR:ccay03037]  Primary cilia and associated proteins   USH complex and associated proteins    125640643 (CDH23) Cell adhesion molecules [BR:ccay04515]  Cadherins   Major cadherins    125640643 (CDH23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_pro DUF6377 Motif Other DBs NCBI-GeneID:  125640643 NCBI-ProteinID:  XP_048715413 EnsemblRapid:  ENSCECG00000013901 LinkDB All DBs Position 7:complement(81398139..81917276) Genome browser AA seq 3357 aa AA seqDB search MKCRFAASNFLHSLLVLELICLGLSNRLPYFINYFFDTYLLINEDTPVGSSVTQLLARDL DNDHLVFGVVGEEASRFFAVESVTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVNI QVGDVNDNAPRFHNQPYSVRIAENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSSFFAI DSGRGIVSVIRGLDYEITQAYQLQVNATDQDKSKPLSTLANLAITITDVQDMDPVFINLP YSTNIYENSPPGTTVRMITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLD RENPFYSTGFILTVKGTELNDDRTPSNATVITTFNILVIDLNDNAPEFNSSEYSVGIPEL AQVGFALPLFIQVQDKDEGLNSVFEVYLVGNNSSHFIISPTSIQGKADIRIRVAVPLDFE TIPRYEFSLFANESVPDHVGFARVKINLINENDNRPIFSQVLYNVSLFENVTVGTTVLRV HATDNDVGTYGKVSYFFSDDPDRFSLDKDTGMITLIARLDFETMQRYTLTVIARDGGGEE TTGRVRINVLDVNDNVPTFQKESYLGALRENEPSVTQVVRLRAADEDSSPNNQITYSIVQ ASAFRRSFDISVSEGYGVISVTRPLDYEQVSNGVIYLTVMAKDAGVPSLNSTVPITIEVF DENDNPPTFSRPSYVITVMEDIMAGATVLFLNATDLDRSREYGQESIIYSLEGSSHFRIN ARSGEITTTSLLDREAKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNYPMWKDDP YFINLVEMTPPDSDVTTVVAIDPDLAENGSLVYSIRPPNKFYSLNSTTGKIRTTGVVLDR ENPNPQEAELMRKIVVSVTDRGRPPLRATGSATVFVNLLDLNDNDPTFQNLPFVAEIPEG LPAGSSVFQVVAIDLDEGLNGQVTYRMQVGMPRMDFLINSSSGLINSTAVLDRERISEYY LRVVASDAGVPSKSSTSTLTVRVLDVNDENPTFFPAVYNVSLPENIRRDFKVVRLNCTDA DVGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVNLDRETMASYTLVLEAIDNGPTGNRR TGTATVHITVLDVNDNRPIFLQSSYEASVPENIPDSSSIVQVKATDADEGVNGRVWYRIV RGNNYNHFRINPSSGLVMRGLRHLDRENNSSHVLEVEAYNSEQGSMKSSVRVIVYVEDVN DEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNGGLVNYKILSGSEGKFEIDEST GLITTIDYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLNEMDEAVQFSNLTYEAVI TENIPPGSEVLRVLARSIDNLNQITYKFDPNTNTQALSLFKINGITGVITVKGQVDREKG DFYTLTVVADDGGPKVDSTVVTITVLDENDNSPQFDITSDSAVNVAEDSAIGRRIAVVLA RDPDAGSNGQVTFSLTSGNIGTVFEIRTTNNTYGEVFVGRPLDRELLDHYTLKIQASDSG VPPRRKEHALRVNILDVNDNPPIIGNPFGYNVSVNENVGGGSAVAQVRATDRDVGLNSVL SYYITQGNDDLIFRMDRVTGEIATRPSPPDREQQNFYRLVVTVEDEGNPSLSATTTVCVT ILDENDNAPVFQQQQYEVTLDEGPATLNATLITIKALDRDEGPNGTVAYAITEGNIVGTF HINSTTGQICTVKELDYEISHGRYTLVVTATDQCPIPSRRLTTTTTVLVNLNDINDNQPT FPRAYEGPFDITEGQPGPRVWTFLAHDGDSGPSGQVEYSIIGGDPLGEFVISPVEGELRV RKDAELDRENIVFYNLTIAAKDRGTPPLSSTVMVGVCVLDINDNDPVLVNLPMNLTLSEN TPISSFVTRILAHDADSGRNALLTFNITAGNAENTFYINGTTGIVYVSRPLDREQVAEYR LTVTVKDNPENTRNARRDFDLLVISIADENDNRPLFTQSSYQAEVMENSPAGTPITVLNG PVLALDNDQGINALVRYQLLGMPMNLFIVNNRTGVILVKPGRVIDREAFLNPLLELTLVA EDIGKLNSTARLTVTILDDNDNRPSFNPAVVTVQLQENSPPGFSVLQVMATDADSGLNQQ LSYRIEGGAQDKFLISANSGVIRVANITIDREERDTYRLTVVAVDRGMPPLSGTSTVNIL VDDVNDYRPEFINPIQTVSVLESAVPGTIIAEVTAIDRDLNPRLEYYIIEILAKDDTNAL VLGQQGAFAVDFKTGAVKVKSSLNREQVATYEVTISVHDNASDVVDHSVSVPNAKLTVNV LDVNDNTPQFRPFGATYFTERIVEGATPGTTLISVSAVDPDKGANGHITYELLNLSPEGY ARLEDLQAGKIIANSTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPIFS QTSYQKPVFEDVPLGMVILRVRATDADSGRFALIQYSLGDGEGKFGINPNTGDIYVLSDL DREKKDHYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFAKRQFSTSMYENEP AGTSVITMTAMDLDEGDNGVVTYSIEGPGVEAFKIDKDSGLITSRRHLQSYERFNLTVVA TDKGRPPLWGTTMLQVEVIDINDNRPVFVRPPNGTILHIKEEIPLQSNVYEVYATDKDDG LNGAVQYNLLKTGAGNKDWEYFSIDSTSGLIQTARRLDREKQAVYSLIIVACDQGQPAYE TMQPLQVALDDIDDNEPIFLRPPRGSPQYQALSVPEHSRPGTIVGNVTGAMDADEGSNAV VYYFIAAGNRENNFKLSQGGKLQVLRDLDRETETYYSIIVKASSNRNWTPPRGHRAARIQ ALDPSTDTTLQEVRIFLDDINDQPPRFSKSDYTAGVATDAKVGSELIKVVALDSDVGNNS LVLYNILGIHYIKQHSNDSEEVASVFSIGNLDGILRTFDLFTAYNPGYFVVDIMASDLAG HNDTAVVGIYILRDDQRVKIIINEIPDKVRQFEEEFISLLSNITGAIVNSDDVQFHVDKK GRVNSAQTELLIHVVNRETNRILDVERVIQMIDDNKEQLRNLFRNYNVLDVQPAITARAP DDLSALQMAIIILAILLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPN TNKYSFDGANPVWLDPFCRNMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSA AKPDDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYMRLKKLLAQRMVHKATT SQGDQSSVTELIQNDLDEEEEQSLSQGSLRFRHKQPVELKGPDGIHVVHGSTGTLLTSDL NSLPEDDQKVLVRSLETLNTDCGSYNDRNARTESAKSTPMHKMREVIMESPLEITEL NT seq 10074 nt NT seq  +upstreamnt  +downstreamnt atgaagtgtcgctttgctgccagcaactttctgcactccctcttggtcttggagctcatc tgtttgggtctgagcaatcggctgccatacttcatcaactatttctttgacacgtacctg ctgatcaatgaggatactcccgtgggctcatcagtgacccagttgcttgcccgggaccta gacaatgaccatcttgtgtttggtgtggtcggggaggaggccagcaggttctttgcagtg gaaagcgtgactggagttgtatggctcaggcagcccttggacagagagactaagtcagaa ttcacagttgaattttctgtcagtgacagccagggggtgatcaaggggacggtgaatatc caagtgggagatgtgaatgacaatgctccaaggtttcacaatcagccctacagtgttcgc attgcagagaacacgccagtgggaactccaattttcatagtgaatgccacagacccagac cagggggcaggaggcagtgtgctttactcctttcagcctccatccagcttctttgccatt gacagtggccgcggcattgtgtcggtaatacgagggctggattatgaaatcactcaggcc taccagctccaggtcaatgcaacggaccaagataaaagcaagcccctgtcaactttggct aacctggcaatcaccatcacagatgtgcaagacatggatccagtcttcatcaacctgcct tacagcacaaacatctatgaaaactcacctccgggtacaactgtgcgtatgataacggca attgaccaggacaaaggacggcccaggggtattgggtacaccattgtctcaggtaacacc aacagcatctttgcactggactacatcagtggagctttaaccctgaatgggccactggac cgtgaaaaccctttctacagcactggattcattctcacagtgaagggcacggagttgaat gatgaccgcaccccctccaacgctacagtgatcaccactttcaacatccttgtcatagac ctaaatgacaatgcccccgagttcaatagttctgagtacagtgttggaatcccagagctg gcccaggtgggctttgcccttccccttttcatccaggtgcaggataaagacgagggactc aacagtgtttttgaggtctacctggtgggaaacaactccagtcacttcatcatctctcca acctcgatccagggaaaggcagacatccgcattcgagttgcagtgccgctggactttgag acaattcctcgctatgaattttctctgttcgcaaacgagagcgtgccagaccacgttggc tttgctcgtgtgaagattaacctcatcaatgagaatgacaaccgccccattttcagccaa gtcctgtacaacgtcagcctgtttgagaacgtcacagtgggaaccacagtcttgagggtc catgcaactgacaatgatgtgggcacttatgggaaagtcagctattttttcagtgatgat cctgacaggttctccctggataaagacacaggcatgatcacgctgatcgcccggttagac tttgaaacaatgcagcgctacacgctgactgtgatagccagggacgggggtggggaagag actacagggcgagtgaggattaacgttctggatgtcaacgataatgtccccaccttccag aaagaatcctatttgggggctctccgggaaaatgagccttcagtcactcaagtggtccgt ctcagggcagctgatgaagattcctctccaaataaccagatcacttacagcatcgtgcaa gcgtcagccttccgccgttcgtttgacattagtgtctctgaagggtatggagtgataagt gtgactcgtcctctggattatgagcaagtctccaatggagttatttatctgactgtgatg gccaaggatgccggtgtcccatcacttaacagcactgttcccatcaccatcgaggtgttt gatgaaaatgataatccacccacgttcagccggccatcctatgtcattactgtcatggag gacatcatggcaggagccacggtgctatttttaaatgccactgatttggaccggtccaga gaatatggtcaagagtcaattatctactccctggaaggttcctctcacttccggatcaac gctcgctcaggtgaaatcaccacaacctctttgctggaccgggaggccaaatcagagtac atactcattgtccgggccgtggatggtggcgtgggtcacaaccagaaaacaggcattgcc actgtgaacatcactttgctggacattaacgataactatcccatgtggaaggatgatccg tacttcattaacctggtggaaatgacccccccagactccgatgtcacaacggtggttgct attgaccctgacctggctgagaatggctcccttgtgtacagcatcaggccaccgaataaa ttctacagtctcaacagcaccacggggaagatccggaccacgggggtcgtgttggataga gagaacccaaacccccaagaagctgaactgatgaggaagatcgtggtctccgtcactgac cgtgggagaccgcctttacgggctactggtagtgccacggtttttgtgaatttgctggac ctcaatgacaatgatcccaccttccagaacctgcctttcgttgctgagatccctgaaggc cttccagcaggttcctccgtcttccaggtggtggccatagacctggatgagggtctgaat gggcaggtgacctaccgcatgcaggtgggcatgccccgaatggacttcctcatcaacagc agcagtgggctcatcaactccacggcagtgctggacagggagaggatctccgagtattac ctcagggtggtagcaagtgatgcgggagtgccgtccaagagttccaccagcaccctgact gtcagagttctggatgtgaatgacgagaaccccaccttcttcccagctgtctacaatgtc tccctacctgagaacatacgccgggacttcaaagtggtccgtctgaactgcactgatgct gatgtgggtctgaatgctgagctcagttacttcatcactggtggaaatcaggatggtaag ttcagtgttggcttcagagatggtgtggtcagaacagtagtgaatctcgacagagaaact atggcatcatataccctagtcctggaggctatagacaatggccccacagggaacaggcgg actgggacagccactgtgcacatcactgtactagatgtcaatgacaatcggcctatcttc cttcagagcagttacgaggccagtgtacctgagaacatcccagactccagcagcatagtg caggtgaaagccacagatgcggatgaaggtgttaatgggagagtgtggtacaggattgtc aggggaaacaattacaaccactttcggatcaaccccagcagtgggctggtcatgcggggc ttacggcacctggacagagagaacaattcctcccatgtccttgaggtagaagcctacaac agtgaacaaggatcaatgaagagctccgttagggtgatagtgtatgtggaagatgtaaac gatgaggtgcctgtgtttacccaacggcagtacaaccgtctggggctgcgagagacggca gggattggaacttctgtcgcagttgtccgggcaacagatcgagacacagggaatggaggt ctggtgaattataaaatcctgtctggctctgaggggaagtttgaaattgatgagagcact ggcctcatcaccaccatcgactacctggactatgagacaaaaaccagttacctgatgaat gtgtctgccacagaccaggcaccccccaacaaccaaggtttctgcagcgtctatgtcagc ctgttgaatgaaatggatgaggctgtgcagttctcaaacctcacctatgaggcagtgatc acagagaacattcccccaggctcggaggtgctgcgcgtcctcgcacgctccattgacaac ctgaaccagatcacctacaagtttgaccctaacaccaatactcaggcactgtccctgttc aagatcaatggaatcactggtgtcatcacagtcaaaggccaggtggatcgagagaagggg gatttctacactttaacagtagtggcagatgatgggggaccaaaggttgactctactgtg gtaaccatcaccgttctggatgagaatgacaacagcccacagtttgacatcacctccgat tccgcggtgaacgtagcagaggacagtgccattgggaggcgaattgctgtagtcttggcc agagacccagatgcaggaagcaatgggcaggtgaccttttctctgacatcaggaaatata ggcaccgtctttgagatccgcaccaccaacaatacctatggagaggtgtttgtgggaagg ccattggatagagaactgctggaccactacaccttaaagatccaggcatctgacagcgga gtcccgcctcggagaaaagaacacgctctaagagttaatatcctggatgtcaacgataac ccaccaatcattgggaatccctttggatacaatgttagtgttaatgagaatgttggtgga ggcagtgctgtggctcaggtgcgggcaactgacagggacgttgggcttaacagcgttctt tcctactacatcacccaggggaatgacgatctcatcttccgtatggaccgagtcactggg gaaatcgccacccgcccgtctcctccagaccgtgagcagcagaatttctaccggctggtt gtcactgtggaggatgagggaaacccatccctttcagccactaccacagtgtgcgtcact atcctggatgagaatgataacgctccagtgttccagcaacagcagtatgaagtcacgctg gatgagggccccgccaccctcaacgccaccctcattaccatcaaggcactggatcgggat gaagggcccaatggcacagttgcatacgccatcacagaggggaatatcgtgggcaccttt cacataaacagcaccacagggcagatctgcactgtgaaggagctggactatgagatcagc catggacgctacaccctggttgtcactgccacagaccagtgtccaatcccatcacgccgt ctcacaaccactacaacggtgttggtgaacctgaatgatatcaatgacaaccagccaact tttccaagagcctacgagggaccctttgacatcacagaaggtcagcctggcccaagggtg tggactttcctggcccatgatggggactcagggcccagtggacaagtggagtacagcatc ataggaggggaccctcttggagaatttgtgatctctccggtggagggggagctgcgagtt cggaaggacgccgagctagatcgagagaacattgtattctataatctcaccattgctgcc aaggatagagggacacctcctctcagctccacagtcatggtgggagtgtgtgttttggac attaatgataatgatcctgtgcttgtcaacctgccgatgaatctcacactcagcgagaac acccccatctccagttttgtgacccgcattcttgcccacgatgctgacagtgggaggaac gctctcctgacctttaacataacagccggcaatgcagaaaacaccttttacatcaatggc actactggcatcgtctatgtaagccgtcccttggacagggagcaggtggctgagtacagg ctgactgtcacagtgaaggacaatcctgagaacacgcgcaatgccaggcgggattttgac ctgctggtgatttcaatagcagatgaaaatgataaccggccacttttcactcagagctct tatcaggcagaggtgatggagaactccccagcaggaactcccatcacagtgctcaatggt ccagttctagctttggacaatgatcagggcatcaatgcactggtgaggtaccagctgctg gggatgccaatgaacctcttcattgtcaacaacagaacaggtgtcattttggtaaaacct ggcagagtgattgacagggaagccttcctgaacccactccttgagctcacactggtggca gaggatattggcaagctgaacagcactgctaggctcactgtgaccatcctggacgataat gacaacaggccatcatttaacccggcggtggtgacagtgcaactgcaggaaaacagtccc ccaggtttttctgtccttcaggtaatggctacagatgcagacagcggcctcaaccagcag ttgagctaccggatcgagggtggagctcaggataagttcctgatcagtgccaactccgga gtaatccgtgtggccaacatcaccatagatagggaagaaagggacacctacaggctgaca gtggtggctgtggatcgaggcatgccccctctctctggcacttccaccgtcaacatcctt gttgatgatgtcaatgattatcggccagagttcatcaacccgatccagacggtcagcgtg ctcgagtcagcagtgcctggcaccatcatcgctgaggtcacagcaatagacagagatctc aacccccgtctagaatattacatcattgagattctggccaaggatgacaccaatgctcta gtgctgggccagcaaggagcatttgccgtggattttaaaacaggagctgtgaaggttaag tcctccctaaacagggagcaagtggcaacgtatgaagtcaccatctctgtccatgataat gccagcgatgttgttgaccattccgtcagcgtgccaaatgctaagctgacagtgaacgtg ctggacgtcaatgacaacactccccaattccgtccatttggggccacctatttcactgag aggattgtggaaggggccacgccagggaccaccctgatttctgtgtctgcagtggaccca gacaaaggtgccaatggacacatcacctatgagttgctgaacctttcacctgaagggtat gcccgacttgaagacctccaagcagggaagatcattgcaaatagcactgtggactatgaa gaggtgcaatggctgaacttcactgtccgggcctcagacaacggctctccccggagatca gctgagatcccagtgtatctccagattgtggatattaatgacaacaatcccatcttcagc cagacgtcttaccagaagccagtctttgaggatgtcccactgggtatggtcatcctgagg gtcagggccactgatgcggactccgggcgctttgctctcatccagtacagcctgggagat ggagagggcaagtttgggataaaccccaacacgggtgatatctatgtcctgtcggacctg gaccgagagaagaaggatcactacacgctgactgctgtagcaagggacaaccctggggac atttctagtaaccgtcgagagaactctgtgcaggtgttgattacagttctggacatcaat gacttcaggccccagtttgccaagcgacagttcagcaccagtatgtatgaaaatgagcca gcagggacgtctgtgatcaccatgacagccatggacctcgatgagggtgacaacggagtg gtgacctacagcattgagggtcctggagtggaggccttcaagattgataaagactccggg ctcatcacatcccgaagacacctgcagtcttacgaaaggttcaacctgacagtggtagca acagacaaaggcaggccacctctgtggggaaccaccatgctccaggtggaggtcattgac atcaatgataaccgaccagtgtttgtccggccacccaatggcaccatcctgcatattaaa gaggaaatacctctccagtccaatgtatatgaagtctatgccacagacaaggatgatggt ctcaatggagctgtacagtacaacttattgaaaaccggagcagggaataaagactgggag tacttcagcatcgactccaccagtggactcatccagacagcaaggaggctcgatcgagag aaacaagcagtgtacagtctgatcatcgtggcatgtgaccagggccagcccgcatatgag accatgcagcctctccaggtggcactggatgacattgatgacaatgaacccatcttcctg agaccacctagaggtagccctcagtatcaagctctgtctgttcctgaacattcccgccct ggtaccattgtggggaatgtcactggtgctatggatgcagatgagggatccaatgctgtc gtctattacttcatagcagctggtaacagggagaacaatttcaagttaagccagggtggg aaactgcaggtgctacgagacctggatcgagagacagagacctattactccatcattgtc aaagcctccagtaacaggaactggacacctcctaggggtcacagggcagccagaatccag gccttggaccccagcacagacaccactctgcaggaagtccggatctttctggatgatatt aatgatcagcctccccgtttctctaagtcagactacacggcaggggttgcgacggatgcc aaggtgggctcagagctgatcaaggtagtggcactggactccgatgtggggaacaatagc ctggtcttgtacaacatcctggggatccattacatcaagcagcactccaacgactcagag gaggtggccagtgtcttcagtattggtaacttggatgggatcctgcgaacctttgacctt ttcacagcctacaaccctggctattttgtggtggacatcatggcttcagacctagcaggg cataatgacactgccgttgtcggaatctacatcttgcgggatgaccagcgggtgaaaatc atcatcaacgagatcccagacaaggtgcggcagtttgaggaagagttcatcagtctgttg tccaacatcacaggagccattgtcaactcagatgatgtgcagttccatgtggacaaaaag ggccgtgtgaactctgcccagacagagttgctgattcacgtggtgaatagagaaaccaat aggattctggatgtggagcgagtgatccagatgattgatgataataaggagcagctgcgg aatctcttcaggaattacaacgtgttggacgtgcagcctgccatcactgccagggcccca gatgacctctcagcgctgcagatggcaattatcatcctggctattctcctcttcctggct gccatgctcttcatcctcatgaactggtactacagaacagtacataaaaggaaattaaaa gctatcgtggccggctcaacagggaaccgaggcttcatggacatcatggacatgccaaac acaaataaatattcctttgatggggctaaccctgtgtggctagatcctttctgcaggaat atggagctagccgcgcaggcagagcatgaagatgacctgcctgagaacctgagtgaaatc acagacctatggaacagcccagccaggactcatggaacgtttggaagagagccctctgct gccaaacctgatgatgaccgttacctgcgagcagccatccaggaatatgacaacattgcc aaactaggtcagatcatgcgggaaggacccatcaagggctctctcttgaaggtggtcttg gacgactacatgcggctgaaaaaactgcttgcccagaggatggtgcataaagccaccacc agtcagggggaccagtcctcggttaccgagctgatccagaatgacctggatgaagaggag gagcagagcctgagccaggggagccttcggttccggcacaagcaacctgttgagctcaaa ggcccagatggtatccatgtggtgcatggcagcacgggcactctgctaacttctgatctc aacagcctgccagaggatgaccagaaagtgctggttcggtccctggagacactgaacacg gactgtggaagctataacgaccgcaatgctcgcaccgagtctgccaaatccacccccatg cacaagatgagggaggtgattatggagagcccactggagatcacagagttatga

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