Caldicellulosiruptor changbaiensis: ELD05_09550
Help
Entry
ELD05_09550 CDS
T05905
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccha02044
]
ELD05_09550
02035 Bacterial motility proteins [BR:
ccha02035
]
ELD05_09550
Secretion system [BR:
ccha02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
ELD05_09550
Bacterial motility proteins [BR:
ccha02035
]
Pilus system
Pilus assembly proteins
ELD05_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF3048
DUF2207_C
Smoothelin
Motif
Other DBs
NCBI-ProteinID:
AZT90863
UniProt:
A0A3T0D730
LinkDB
All DBs
Position
complement(1948243..1949454)
Genome browser
AA seq
403 aa
AA seq
DB search
MAEYIYRALDASGKFIQGTVIAEDVNSALENLRARNIYIVEIKEKSALHKEIKLPFGQKA
TIKDLSVFCRQFATMLAAGISILSCLDVLRNQYRGRPFGKVIDDLYEKVERGTLLSTAMR
EHPRFFPPILINMVEAGEVAGSIDKSMDKMATHFEKELKLRQKIVNALIYPAIVIGVAVI
VLIILLTFVIPTFVGLFDELNVELPATTKFVINSSKFMQKNGLYLLFFIIALILGYKIFK
GTKSGGILIGKIKIKIPVIGRVVLGQVTSRFTRTLATLLNAGVPLITALDTTKNVMANTY
IEQEFEKVIERVKGGEGLSYPIEDIGIFPQLVNIMLKTGEETGRLEYMLEKAADYYENEV
ENQITRLTALFEPVMIVCLAVMVGFLLASIIMPMFKLYGSIGS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatatctaccgagcgttagatgcctcaggtaagtttatccaaggaacggta
attgcagaagatgtaaatagtgctcttgaaaacttaagagcaagaaatatttacatagtt
gaaataaaagaaaaaagtgctttgcacaaagaaataaaactaccatttggacaaaaagcc
accataaaggacttatcagttttttgtagacagtttgcaacaatgcttgctgcaggtatt
tcgattttgagttgtcttgatgtgctcagaaatcagtacagaggaagaccttttggcaag
gtaatagacgatttgtatgagaaggtagaaagaggaacattgctttccactgctatgaga
gagcatccaaggttttttccaccaatattaatcaacatggttgaagcaggtgaggttgca
ggttccattgataaatcaatggacaagatggctactcattttgaaaaagagttaaaactt
cgacaaaagatagtaaatgcacttatctatcctgcaattgttattggtgttgctgtgatt
gttttgataattctcttgacatttgttattcccacttttgttgggctatttgacgagttg
aacgttgaacttcccgcaacaacaaagtttgtcataaactcgagcaaatttatgcagaaa
aatgggctttacttacttttcttcataatagcgctcatattagggtacaaaattttcaaa
ggtacaaaaagtggtgggattttaataggtaaaattaaaatcaaaatacctgtaattgga
agagttgttttaggtcaggtaaccagccgttttacaaggacgctggcaacacttttaaat
gctggtgttcccttgataacggctttggatacaactaaaaatgtcatggcaaatacctac
attgaacaggagtttgagaaggttattgagagggtgaaaggtggtgaggggctttcttat
ccgattgaggatattgggatttttccacagcttgtgaatataatgttaaaaactggtgaa
gagacaggaaggcttgagtacatgcttgaaaaagcagcagactattacgaaaacgaggtt
gaaaatcaaataacaagactgacggcattgtttgagcctgtgatgattgtatgtttagct
gttatggtaggatttttacttgcgtcaattatcatgccgatgttcaagctttatggcagc
atcggttcataa
DBGET
integrated database retrieval system
