KEGG   Coprinopsis cinerea: CC1G_00096
Entry
CC1G_00096        CDS       T01275                                 
Name
(RefSeq) small nuclear riboprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cci  Coprinopsis cinerea
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_00096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_00096
   03041 Spliceosome [BR:cci03041]
    CC1G_00096
   03032 DNA replication proteins [BR:cci03032]
    CC1G_00096
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CC1G_00096
Spliceosome [BR:cci03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC1G_00096
  U2 snRNP components
    CC1G_00096
 Complex B
  U1 snRNP components
    CC1G_00096
  U4/U6.U5 tri-snRNP components
    CC1G_00096
 Complex C
  U2 snRNP components
    CC1G_00096
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC1G_00096
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 6013514
NCBI-ProteinID: XP_001836960
UniProt: A8NWQ9
LinkDB
Position
5
AA seq 81 aa
MSVNPVNPKPFLQELTGKPVYVRLKWGLEYKGFLVSTDGYMNLQLANTEEFQDGKSNGAL
GEVFIRCNNVLYIREAPPEDS
NT seq 246 nt   +upstreamnt  +downstreamnt
atgtcggttaatccagtaaaccccaagccattcctccaggagctcactggaaaacccgta
tatgttcggctaaagtggggtttggagtacaagggtttcctcgtcagtaccgatggctac
atgaacctccaactggccaatacggaagagtttcaagatggcaagtccaacggtgctctc
ggagaagtgttcattcggtgcaacaacgtcctctacattagagaggcaccgccggaagac
tcatga

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