Coprinopsis cinerea: CC1G_00392
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Entry
CC1G_00392 CDS
T01275
Name
(RefSeq) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cci
Coprinopsis cinerea
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cci03016
]
CC1G_00392
Enzymes [BR:
cci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CC1G_00392
Transfer RNA biogenesis [BR:
cci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CC1G_00392
Prokaryotic type
CC1G_00392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
6013813
NCBI-ProteinID:
XP_001837256
UniProt:
A8NXS8
LinkDB
All DBs
Position
5
AA seq
834 aa
AA seq
DB search
MSSIIVHEREQDGEDAERYAKRQRTDDSGTSTLQAAEAIAGDANDAEEHVLPPSHALLGV
PLPVKTEEGQMKFLETDVGISEYIGRGDAKVEGIIKQRFTDFMVFEVDQDGNVIHLKSLD
KPKGVKDEPEVQTEKPTPGQPSEPEKDSVNNAEPIEDEPWPASFDERLRPFLSDESRERL
KAMFFEGPEPPLVSDSGWAGRAAAKADQDNGPAPEPDPTPEPSSNCGRGGRGGRGGRGRG
GRGAGRGGRPMREDNRKVISEPMESKDTRTAFHQTIRELFKGKLDTETDTSAPSDDGQRI
VIKWARSGGRGAGQRGGGGGGRNARGTYPPYIHFTLQKTNRDTQDALGHLSRILHVSVKD
LSVAGTKDKRGVTVQRVSLKRNNKTVEDIWRLGNGIGTSRTAETALTQRGERGVRIADLV
YRKAGLELGMLKGNAFIITLRNVKVESREVLDEALNTIKMKGFINYYGMQRFGTASVPTH
AIGLALLKSDWNRAINLLLQKRYGEHPDVAAARDAWLVDRDLDKALQLLPRRVVAERCIL
ESFKKMKGDTRNAMGALSTIPRNLRLMYIHAYQSYVWNAIVSERIRMFGVEKPVVGDLVF
EKNAASDQMEVDPERREGDEDSQGKRFISSEDIGAQSQWASEQGRKRNRKPYVPPKIKTL
TEEDLDKYTIFDVIMPLPGTDVAYPGGRLGERYREFLRADGLDPDNFVRKQKEYTLNGSY
RTILHLPKELSWSVLQYTDPDVPLAQSDEDKLLGFDPPVVVEDGKFTALQIRLQLGSAAY
ATMALREITKMDTSTHTQTSLTSASEDQKYKGQENDSVEVEVAGESEVLTESLD
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatcatcgtccacgagagagaacaagacggcgaagacgcagagcgctacgca
aagaggcaaaggactgacgacagcggcacgtcaactctccaagctgcagaagctatcgca
ggcgacgcaaacgacgctgaagagcatgtcctcccacccagccatgctttgctcggagta
ccactccccgttaaaacagaggaagggcaaatgaagttcttggagactgacgtcggaatc
tctgaatacattggacgcggagatgcaaaagtagagggaatcatcaagcaaaggttcacc
gacttcatggtctttgaagttgatcaagacgggaatgtaatccaccttaaaagccttgac
aaacccaaaggcgttaaagacgagcccgaggtccagacagagaaaccgacgccaggccaa
ccctctgaacctgaaaaagattctgtcaataatgcagagcccatagaagacgaaccttgg
ccagcatcgtttgatgaaagactcaggcccttcttgtcagacgagagtagggaaaggttg
aaggcaatgttcttcgagggcccggaaccgccgctggtgagcgatagcggttgggcggga
agggctgctgccaaagcagaccaggacaatggacccgcacctgaacctgatccgactccc
gaacctagctctaactgtggaagaggtggaagaggtggaagaggtggaagaggaaggggt
ggtcgaggcgcaggccgtggtggacgacccatgagggaggataaccgtaaagtcatctca
gagccgatggaatccaaagacactcgaacggcattccatcaaacaatcagggaattgttc
aagggcaagttggacacggaaacggacacgtctgctccctcggatgacggtcagagaatc
gtgatcaaatgggccaggagtggtggacgcggagcaggccagcgaggcgggggcggaggt
gggcgaaatgctcgaggaacatacccgccttacatccacttcacgttgcaaaagacgaac
cgtgatacccaagacgctcttggacatctgtctcgaattcttcacgttagcgtcaaagat
ttgtccgttgcggggacgaaggacaaacgcggcgttaccgtgcagcgcgtttctttgaaa
agaaacaataaaactgtcgaagacatttggaggctcggaaacggtatcggcacttcacga
actgcggagactgcgcttacccaacggggtgagaggggtgtgcgcatcgcagacctcgtt
tatcgtaaggccggactagaacttggcatgctcaagggaaatgcctttatcattactttg
cggaatgtcaaggtggaatcaagagaggtgctggatgaagctctcaacaccattaagatg
aaggggtttatcaattactacggcatgcagcgttttggaaccgcgtctgtcccaacccat
gctatcggcctggctttattgaaatctgactggaatcgggcgatcaatcttctcctgcaa
aaacgttacggggaacatccagatgtggccgctgctcgcgatgcctggctcgtcgaccgg
gacttggacaaagctcttcagctgctgccccggcgcgtggttgcagagcgttgcattctt
gaaagtttcaagaagatgaagggtgacactcgaaatgctatgggcgctctctcaactatt
ccccgcaatttgcgcttgatgtatatccatgcctaccaatcatacgtctggaatgccatc
gtctcggagcgaatccggatgttcggcgttgaaaaacctgtggttggggatttggtcttc
gaaaagaatgcagcaagcgatcagatggaggtagatccggagagaagggaaggtgacgaa
gactcgcaaggtaaaagattcatttcttcggaggacatcggcgctcaaagtcaatgggcc
tcagaacaaggccgtaaacggaatcgtaaaccctacgtcccaccaaagatcaagacactc
accgaagaggaccttgacaaatacaccatcttcgacgtgatcatgccactcccgggtact
gatgtcgcttacccgggtggacgtctgggagagcgttaccgagagtttctacgcgcagat
ggactcgatcctgacaattttgtgagaaaacaaaaggagtacaccttgaatggttcctac
cgcacaatccttcaccttcccaaggaactatcatggtctgttctgcaatacacagatccc
gatgtcccacttgcccaatcggacgaagataaactattgggcttcgatccacccgttgtt
gtcgaggatggcaaatttacggcactccagatcaggttacaacttggaagtgctgcatat
gctaccatggctcttcgagagatcacgaaaatggacaccagtacacacacccagacgagc
ctcacgagcgcttcagaggaccaaaagtacaagggccaagagaatgattcagtggaggtg
gaggtcgctggggaaagtgaagtcctcacggaaagtctcgattga
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